Gene Information

Name : I635_20290 (I635_20290)
Accession : YP_008181951.1
Strain : Alteromonas macleodii Ionian Sea UM7
Genome accession: NC_021713
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4583773 - 4584576 bp
Length : 804 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGAAAGTAAGCCGTAGTGCTTATTACGCTTGGCTCAAACGGCCAGTCAAAATCATCACAGCAGAGCAACTGAACTTATA
TCGAATGGCAAAGCACTTCTTCGAGAAAAGCAGAAATAGCTTAGGTTATCGGGAGCTTAGAAAGAAGTTACGCAGAGAGG
GCTTTAACGTCAGTGATTATGGCGTTCAGAAGTTAATGGCAACACTTGGCTTAGTTGTGACTCAACGAGTGGCATACAAG
GTGACAACCAAACGCAAACACAGTGATGCTGTTGCTGATAACCTGTTGAACCAGAACTTTAACCCTGTTGCACCAAATCA
GGTCTGGGCTGGTGATGTGACTTACTTAAGAACAGGTGAAGGCTGGATGTACTTAGCCATTGTTATGGACTTATATTCAC
GCCGCATCGTTGGTTGGCATATCGACAAACGAATGACGACTGACTTAGTAAGCAAAGCTATGATGAAGGCTTATAACTTG
CGCCAACCGCCTAAAGGCTTAGTGTTTCACTCGGATAGAGGCTCACAATACACCAGTAAGCATTATCGTAAATTGCTAGC
CAATTTCGGTATAAGAGCGAGCATGGGTGATGTTGGTGCTTGTTGGGATAATGCGGTAGTTGAAAGGTTCTTCGGCAGCT
TAAAACATGATTGGCTATTGAAAATACCACAACCAACTCGTGAACATATGAGAAATGATGTAACTGCGTATATGCGCTAT
TACAACTTAGAGCGACTTCATACCGCTAATGGTGATCTGTCGCCAATAGAATATGAGCAAAGTTCCTTAAGAAAAGTGTC
CTGA

Protein sequence :
MKVSRSAYYAWLKRPVKIITAEQLNLYRMAKHFFEKSRNSLGYRELRKKLRREGFNVSDYGVQKLMATLGLVVTQRVAYK
VTTKRKHSDAVADNLLNQNFNPVAPNQVWAGDVTYLRTGEGWMYLAIVMDLYSRRIVGWHIDKRMTTDLVSKAMMKAYNL
RQPPKGLVFHSDRGSQYTSKHYRKLLANFGIRASMGDVGACWDNAVVERFFGSLKHDWLLKIPQPTREHMRNDVTAYMRY
YNLERLHTANGDLSPIEYEQSSLRKVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-38 43
tnpB CAB61574.1 transposase B Not tested HPI Protein 9e-39 42
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-45 42
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-45 42
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-45 42
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-45 42
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-45 42
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-45 42
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-45 42
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I635_20290 YP_008181951.1 transposase IS3/IS911 family protein VFG1122 Protein 1e-45 42