Gene Information

Name : I635_13330 (I635_13330)
Accession : YP_008180583.1
Strain : Alteromonas macleodii Ionian Sea UM7
Genome accession: NC_021713
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2988874 - 2990013 bp
Length : 1140 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
GTGAACCACGATACGGTTAAAAACGATTATTATTGGATGGCTAAGGCCATCCAACTTGCCAATAAAGGGCGCTTTACTAC
CTCGCCCAACCCCCGCGTTGGCTGCGTGATTGTTGACGAAGACAGTCAGTTGTTAGGCCAAGGTTATCACATCCAAGCGG
GCACACCTCATGCCGAAGTACACGCACTTAGACAAGCAGCTCATGCACGTTCTGAAGGTGCCAAAGGTGCAACCGCTTAC
GTTACCCTAGAGCCCTGCAGTCATTTTGGGCGTACGCCGCCTTGCGCTAAAGCCCTTGTTGAAGCACAGGTTGCGCGAGT
TGTCATTGCTATGACTGACCCTAACCCGAACGTATGCGGCAACGGTATAAGTATGTTGCAAGAAGCGGGTATTGAAGTGG
TGAGCGAGGTAATGGCTGCAGAAGCCGCTGCGCTTAATCCCGGTTTTATAAAGCGTATGCTAACCGGTAAACCCTTTGTT
CGCGTAAAGTTGGGCATAAGTGTTGACGGAAAAATAGCCTTGCAAAACGGTGTGAGCCAATGGATTACCACTCCAGAAGC
CAGACGAGATGTACAACACTATCGCGCACAAAGCTGTGTGGTGTTAACGGGGTCGGGTACAGTGAAGGCCGACAATCCTA
GCCTTTTAGTACGCGGGAAAGAGGCGCAGTTTGACGATTATCCCCTTGAACATGTTCGCCAGCCTGCTCGGGTTGTGGTA
GACAGTAAAAGCACGCTTAGTAGAGACTTTGCGCTCTTTAATGACGGCAATATGACCTTTACTGCTACGTCTCAGGCTCA
CCCAGATACGGCAAGCCAGCATTACCTTCAGCTTGATGAAAAAGACGGTAAGCTTGACTTACACGCACTAATGTTGGCAT
TAGGCGATAAGCAATTTAACGAAGTATGGGTAGAAGCGGGGCCAGGCCTTGCCGGTGCACTCTTGCAAGAAGGGCTGGTG
GACGAGCTTATTTGTTACCAAGCGCCTAAGCTATTAGGTGATAAAGGGGTAAGTATGGTCAATTTGCCAGCGTTTACCGC
TTTAAATCAATCTATTTCACTTTCACTTATTGAAAATCGTCAGGTGGGTAACGATATTAAGCTTATCTTCCGGCCCGACG
TTAGCAACACCTGTCGCTAA

Protein sequence :
MNHDTVKNDYYWMAKAIQLANKGRFTTSPNPRVGCVIVDEDSQLLGQGYHIQAGTPHAEVHALRQAAHARSEGAKGATAY
VTLEPCSHFGRTPPCAKALVEAQVARVVIAMTDPNPNVCGNGISMLQEAGIEVVSEVMAAEAAALNPGFIKRMLTGKPFV
RVKLGISVDGKIALQNGVSQWITTPEARRDVQHYRAQSCVVLTGSGTVKADNPSLLVRGKEAQFDDYPLEHVRQPARVVV
DSKSTLSRDFALFNDGNMTFTATSQAHPDTASQHYLQLDEKDGKLDLHALMLALGDKQFNEVWVEAGPGLAGALLQEGLV
DELICYQAPKLLGDKGVSMVNLPAFTALNQSISLSLIENRQVGNDIKLIFRPDVSNTCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-60 47
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-60 47