|
Name : I634_18645 (I634_18645) Accession : YP_008177807.1 Strain : Alteromonas macleodii Ionian Sea U8 Genome accession: NC_021712 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 4249435 - 4250661 bp Length : 1227 bp Strand : + Note : COG1459 Type II secretory pathway, component PulF DNA sequence : ATGGCGGCGTTCGCTTATAAAGCGGTTAATGCCCGCGGTAAGAACACAAATGGCGTGCTTGAAGGCGATAATGCCCGTCA GGTGCGCCAACAGCTGCGCGAAAAGGGCTTAATTCCTTTGGAAGTAGAGCAAGTTGCCGAGCGCACACAAAACGAAGGCA AAGGGCTTTCATTTTCACTGTTTAAACCACGCATTTCAGCCTCCGATTTAGCGCTACTTACACGGCAAATGGCTACCCTT GTAGAGTCGGCCCTTCCGGTTGAAGAAGCCTTGCTTGCCGTTGCGGAACAATGCGAAAAGTCCCGCCAGAAAAACATGAT GATGGCAGTACGCAGTAAAGTCGTGGAAGGTCACGGGCTTGCTGATGCCCTAGGACAGTTTCCCAGTGTGTTTGACGAGT TATACCGCGCCATGGTGGCGGCAGGTGAAAAGTCAGGCCACCTTGATACCGTGCTTAACCGCTTAGCCGACTATACCGAG CGCAGGCAGCAAACCCGAAGCCAAATTACTCAGGCGATGATTTATCCATCGTTAATGCTGTTTTTTGCAATGGGTATCGT ACTGCTGCTTTTAACCGTGGTAGTACCAAAAATTGTGGGGCAATTCGACCACATGGGGCAAGACCTTCCGGGTATTACCC AATTCCTTATTTCAGTGAGCACTTGGCTTCAAAACTACGGGTTGTTCATGCTAATCGGCATAGGCGTGCTTATAGTTATT ATACAGCGCGTATTGCAGCAAAAGCATATGAAGCTGCGCTATCACAAAGCGCTTTTAACCTTACCTTTGATAGGCCGCGT GTCGCGCGGTCTAAACACGGCCCGCTTTGCACGTACGTTAAGTATATTAAGTGCCAGCGCAGTGCCGCTACTTGAAGCTA TGCGTATTTCAGGCGATGTCCTTGAAAATCAGCATATTAAAAATCAAGTAGCCGACGCCGCTATTAACGTTAAAGAAGGT AGCAGTTTGCGGGCTGCGCTGGATAACACGAAAATGTTTCCACCTATGATGATGCATATGATTGCGTCAGGTGAAAAGTC GGGCGAATTACAGCAAATGCTAGCTCGCGCCGCAGATAATCAAGATAGGGAATTTGAAGCGCTTATTGGTGTCTCACTTA AGGTATTTGAACCCTTACTTATTGTATCGATGGCGGGCATTGTTCTGTTTATCGTTATGGCAATATTGCAACCAATCTTA GCATTGAACAACATGGTGAATATTTAA Protein sequence : MAAFAYKAVNARGKNTNGVLEGDNARQVRQQLREKGLIPLEVEQVAERTQNEGKGLSFSLFKPRISASDLALLTRQMATL VESALPVEEALLAVAEQCEKSRQKNMMMAVRSKVVEGHGLADALGQFPSVFDELYRAMVAAGEKSGHLDTVLNRLADYTE RRQQTRSQITQAMIYPSLMLFFAMGIVLLLLTVVVPKIVGQFDHMGQDLPGITQFLISVSTWLQNYGLFMLIGIGVLIVI IQRVLQQKHMKLRYHKALLTLPLIGRVSRGLNTARFARTLSILSASAVPLLEAMRISGDVLENQHIKNQVADAAINVKEG SSLRAALDNTKMFPPMMMHMIASGEKSGELQQMLARAADNQDREFEALIGVSLKVFEPLLIVSMAGIVLFIVMAILQPIL ALNNMVNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-88 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-87 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| I634_18645 | YP_008177807.1 | general secretion pathway protein F | VFG2049 | Protein | 1e-82 | 53 |
| I634_18645 | YP_008177807.1 | general secretion pathway protein F | VFG0181 | Protein | 3e-84 | 50 |
| I634_18645 | YP_008177807.1 | general secretion pathway protein F | VFG1870 | Protein | 5e-75 | 44 |
