Gene Information

Name : I634_12820 (I634_12820)
Accession : YP_008176661.1
Strain : Alteromonas macleodii Ionian Sea U8
Genome accession: NC_021712
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2917463 - 2918602 bp
Length : 1140 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
GTGAACCACGATACGGTTAAAAACGATTATTATTGGATGGCAAAGGCCATTCAACTTGCCAAAAAAGGGCGCTTTACTAC
CTCGCCCAACCCCCGCGTTGGCTGCGTGATTGTTGACGAAGACAGTCAGTTGTTAGGCCAAGGTTATCACATCCAAGCGG
GCACACCTCATGCCGAAGTACACGCACTTAGACAAGCAGCTCATGCACGTTCTGAAGGTGCCAAAGGTGCAACCGCTTAC
GTTACCCTAGAGCCCTGCAGTCATTTTGGGCGTACGCCGCCTTGCGCTAAAGCCCTTGTTGAAGCGCAGGTTGCGCGAGT
TGTCATTGCTATGACTGACCCTAACCCGAACGTATGCGGCAACGGTATAAGTATGTTGCAAGAAGCGGGTATTGAAGTGG
TGAGCGAGGTAATGGCTGCAGAAGCCGCTGCGCTTAATCCCGGTTTTATAAAGCGTATGCTAACCGGTAAACCCTTTGTT
CGCGTAAAGTTGGGCATAAGTGTTGACGGAAAAATAGCCTTGCAAAACGGTGTGAGCCAATGGATTACCACTCCAGAAGC
CAGACGAGATGTACAGCACTATCGCGCACAAAGCTGTGTGGTGTTAACGGGGTCGGGTACAGTGAAGGCCGACAATCCTA
GCCTTTTAGTACGCGAGAAAGAGGCGCAGTTTGACGATTATCCCCTTGAACATGTTCGCCAGCCTGCTCGGGTTGTGCTA
GACAGTAAAAGCACGCTTAGTCGAGACTATGCGCTCTTTAATGACGGCAATATGACCTTTACTGCTACGTCTCAGGCTCA
CCCAGATACGGCAAGCCAGCATTACCTTCAGCTTGATGAAAAAGACGGTAAGCTTGACTTACACGCACTAATGTTGGCAT
TAGGCGATAAGCAATTTAACGAAGTATGGGTAGAAGCGGGGCCAGGCCTTGCCGGTGCACTCTTGCAAGAAGGGCTGGTG
GACGAGCTTATTTGTTACCAAGCGCCTAAGCTATTAGGTGATAAAGGGGTAAGTATGGTCAATTTGCCAGCGTTTACCGC
TTTAAATCAATCTATTTCACTTTCACTTATTGAAAATCGTCAGGTGGGTAACGATATTAAGCTTATCTTCCGGCCCGACG
TTAGCAACACCTGTCGCTAA

Protein sequence :
MNHDTVKNDYYWMAKAIQLAKKGRFTTSPNPRVGCVIVDEDSQLLGQGYHIQAGTPHAEVHALRQAAHARSEGAKGATAY
VTLEPCSHFGRTPPCAKALVEAQVARVVIAMTDPNPNVCGNGISMLQEAGIEVVSEVMAAEAAALNPGFIKRMLTGKPFV
RVKLGISVDGKIALQNGVSQWITTPEARRDVQHYRAQSCVVLTGSGTVKADNPSLLVREKEAQFDDYPLEHVRQPARVVL
DSKSTLSRDYALFNDGNMTFTATSQAHPDTASQHYLQLDEKDGKLDLHALMLALGDKQFNEVWVEAGPGLAGALLQEGLV
DELICYQAPKLLGDKGVSMVNLPAFTALNQSISLSLIENRQVGNDIKLIFRPDVSNTCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-61 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-61 47