Gene Information

Name : I634_00530 (I634_00530)
Accession : YP_008174258.1
Strain : Alteromonas macleodii Ionian Sea U8
Genome accession: NC_021712
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 112388 - 115681 bp
Length : 3294 bp
Strand : -
Note : COG3886 Predicted HKD family nuclease

DNA sequence :
ATGACAGCTACAAATTATTTGGTTACCGGTAGAAACCAGCAATACCTTCTACATGAAATTCGCGATGCCCTTAAAAGCGC
TACAAATATAGAAATAGCCGTTTCGTTTATTCGTATGTCAGGGCTAAGCCTAATCATTCAAGACATTGAAGATGCGATGA
ATTCAGAAATACGTGATGTTAAGTTATCGCTTTTAACTTCAGACTACATGAACATTACCGAGCCACATGCGTTAAAGCGT
TTAATGCTGCTGAAGGAACGTGGCGCTGATATCCGCATTTATGAAAGTAAGCAAGCTACAAGCTTTCACCTAAAATCATA
TATTTTCGTCAAGAGCAGTGAAGATATATTAATTTCAGCTAGAGCGTTTGTTGGGTCTAGCAATATAAGTAAAACCGCGC
TTACCGATGGTATTGAGTGGAATTACCGAATCGATTACCCAAACGATAATGATGAAGAAGCCATCGCTAGAATTGACGAA
ATTCGAGAGCAGTACAGCTATCTATCCACCCTGCCTCAAGTTAAGCCACTAACATACGACTTAATAGCTGATTACGAGAT
TAGGTACAACACAGCGAGAGTTGTTACACCAATTCAATCTGCTGCATCACTGCCGGATGAAAAAGAGCATGAAATTCCGG
AGCCAAGAGAACATCAAGTAACAGCACTTGCAGCACTCAAGCAGGCTCGAGAGGACGGAATTAAGAAAGGCTTAGTGGTA
CTAGCAACAGGTATGGGGAAAACCTACTTAGCGGCTTTTGATTCTGTGCAGGTAAATGCTAAAAAAGTACTTTTTGTAGC
ACACCGAGAAGAGATCTTACTTCAAGCAGAGGCTAGCTTTCTTAAGATACACCCAAGCAAAAAGGTAGGTCGATACAGCG
GAAAACAAAAGGATGAAGAATATGACTTTTTGTTTGCCTCTATACAAACCATAGGGCAATCCACTCACCTAGCGAAGTTT
CCCACTGCTGCTTTCGATTACATTGTTGTAGATGAATTTCATCATGCCGCAGCAGGTGGTTATCAACGTTTACTAGAATA
TTTCACGCCTTCTTTTTTACTGGGGTTAACCGCTACGCCCACTAGAACTGACGGTAGCGATATCCTTAAACTATGTGACA
ACAATCTCATATATCAGCAAGACTTGTTTGATGGTGTGAAAGCAGAGGCATTATGCCCTTTTTCTTACTTCGGCATTTTC
GACAAGGAAGTGGATTACGATCACCTGCCTTGGCGTAATGGTAAGTTCGATCCTGAAAAACTTTCCAATAAACTAGCGAC
TAAAGGCCGTGCAAAGCATGTGCTTACTGAGTGGAAAGTAAAGTCGCAAGATGTATCACTCGCTTTTTGCGTATCGCGAA
AACACGCTGACTACATGGCAGATTACTTCAATCAACAAGGAATTACAGCTGCCAGCGTTCACTCAGACTCGTCACTTACG
CGTAGTGAGGCATTAGAGAAGCTCAACAACGGCGATATTAAAATTTTATTCTCGGTAGACCTTTTCAACGAAGGTGTAGA
TTTACCGAAGATCGATACCGTATTAATGCTTAGGCCTACTGAATCAAAAATCCTTTTTTTACAACAGATGGGCCGCGGCC
TTCGTAAAAGCGAAGGAAAGGATAGACTTATTATTTTAGACTTTGTGGGTAATCATCATAGCTTTTTAAACCGCCCCGAA
ATGCTGTTTGCCAGTATTCTCGATGGACCGCAAAACCGCAGAAAAATGGTCGACCTTGCAAAAAATGCCAATAAACTACT
CCCCGACGGATGTTACGTTAATTTCGACTTAGAGTTTATCGATTTCCTTACAAGCATCTCTCAAGACGAGCTTGATACTC
AATACGACAAGCTGAAGGAAACGCTAGGCAGAAGGCCTACGTACACTGAGTTTTATAAATCGGGCGCTAGCTTGGAAAAA
CTAAGACGAAACCGTGGCTCGTGGTGGGAATTTGTTGATAGCAAGGGCGACCTTAAAGCTGACGAACTGGAAGTGCTGGA
AGAACATCTGCAATGGTTTAAAGACCTAGCTGTTACTCGTACTTCGAAGTGCTACAAGCTGGTGTTACTTGCCACGCTGA
TTGAGCATAAAGCTTTTCAGTCACAGGTAAGTGTTGATGACTTAGCAGAATGGGCACGACAGTGGTTTTTAGATAACCCA
GAATGGATTTCTGACTTGCCAGAAAGCAAACAGCAATTATCGTCGTTAAGTAAATCAGAATGGCGAGCGCATTGGCGTAG
TAATCCAGTTAAGTTTTGGTGCACTGAAGAGCCTGAATCAAAGGTTGCTTGGTTTGATATTAGTAATCAGCAATTTCATT
TCAAACAAAGTATTTCAGCAATCCAACATGATTTGTTTTTAGCAATGTCCGTTGAGATTAATAACCAACGTCTTGCGAAC
TACAGACATAAGAAGTTAGCTATAACGGCCCCTTCTTCCAATAATATTGTTCAGTTTCCCGAGAAAGTGCAGCTACCATT
TTTCCCCGATATTAAAATAGCTTGCGGCCATTTCAAAACCGGTAATGCCGAGTCGTCTGAACTTGTAAATGTACCATACG
GCTATGGGAATATAGATAATTCGCGCCACTTCATTGCTCGCGCATCTGGTAACTCGATGAACGGTGGTAAGAACCCTATT
TATGATGGTGACTACTTGCTCTTAGAGCAAATCACACCGAATAATGCTGGCAGTATTAGCAACACAACTGTTGCTATCGA
GAGGCAGGATGAAATGGGCGATAATCAGTACTTGCTAAGAAAGGTACTTAAAAACCCGGATGGTTCTTATACCTTAAGGG
CTGCCAACCCAGACTATGGCGATATCATAGCAAGTGAAGAAATGGTGACATTCGCGCGCCTAAAAGGAAAAGTCGACCCG
CTGGAACTTTTCGTAGGACACGAGCTAATGCGTGAAGAGATTCCACCATTATTTGATGAAGAGTTTAACCCCGGAAATTG
GCAATCGGGGCATGTGGTGCTCAAAGAGAAGAATGTTCAGATTTTGTTAGTTACTCTAAACAAACAAGGAAAAGGCAGTG
AGCACCAGTACCATGATTACTTTATTGACGATAAGCATTTTCATTGGCAGTCGCAAAATAGTACTTCCCCAAGTAACAAG
CGTGGCAGAGAGATAATTGAACATCAGAAATTGGGGAGCCGCGTTTACCTCTTCGTTCGAGAGAGCAAATTGAGAGGGAA
AACAGCCGCACCTTTTATGTTCTATGGCGAAGTGAAATACGTTAAACATGAAAGTGAAAAACCGATGAATGTGACTTGGG
AGTTATTGAATTAA

Protein sequence :
MTATNYLVTGRNQQYLLHEIRDALKSATNIEIAVSFIRMSGLSLIIQDIEDAMNSEIRDVKLSLLTSDYMNITEPHALKR
LMLLKERGADIRIYESKQATSFHLKSYIFVKSSEDILISARAFVGSSNISKTALTDGIEWNYRIDYPNDNDEEAIARIDE
IREQYSYLSTLPQVKPLTYDLIADYEIRYNTARVVTPIQSAASLPDEKEHEIPEPREHQVTALAALKQAREDGIKKGLVV
LATGMGKTYLAAFDSVQVNAKKVLFVAHREEILLQAEASFLKIHPSKKVGRYSGKQKDEEYDFLFASIQTIGQSTHLAKF
PTAAFDYIVVDEFHHAAAGGYQRLLEYFTPSFLLGLTATPTRTDGSDILKLCDNNLIYQQDLFDGVKAEALCPFSYFGIF
DKEVDYDHLPWRNGKFDPEKLSNKLATKGRAKHVLTEWKVKSQDVSLAFCVSRKHADYMADYFNQQGITAASVHSDSSLT
RSEALEKLNNGDIKILFSVDLFNEGVDLPKIDTVLMLRPTESKILFLQQMGRGLRKSEGKDRLIILDFVGNHHSFLNRPE
MLFASILDGPQNRRKMVDLAKNANKLLPDGCYVNFDLEFIDFLTSISQDELDTQYDKLKETLGRRPTYTEFYKSGASLEK
LRRNRGSWWEFVDSKGDLKADELEVLEEHLQWFKDLAVTRTSKCYKLVLLATLIEHKAFQSQVSVDDLAEWARQWFLDNP
EWISDLPESKQQLSSLSKSEWRAHWRSNPVKFWCTEEPESKVAWFDISNQQFHFKQSISAIQHDLFLAMSVEINNQRLAN
YRHKKLAITAPSSNNIVQFPEKVQLPFFPDIKIACGHFKTGNAESSELVNVPYGYGNIDNSRHFIARASGNSMNGGKNPI
YDGDYLLLEQITPNNAGSISNTTVAIERQDEMGDNQYLLRKVLKNPDGSYTLRAANPDYGDIIASEEMVTFARLKGKVDP
LELFVGHELMREEIPPLFDEEFNPGNWQSGHVVLKEKNVQILLVTLNKQGKGSEHQYHDYFIDDKHFHWQSQNSTSPSNK
RGREIIEHQKLGSRVYLFVRESKLRGKTAAPFMFYGEVKYVKHESEKPMNVTWELLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A0337 YP_001216293.1 DEAD/DEAH box helicase Not tested VPI-1 Protein 0.0 46