Gene Information

Name : I607_01380 (I607_01380)
Accession : YP_008170346.1
Strain : Alteromonas macleodii Ionian Sea U4
Genome accession: NC_021710
Putative virulence/resistance : Virulence
Product : two component response regulator transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 316065 - 316748 bp
Length : 684 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAATACTTGTAGTCGAAGACGAAGTAAAAACGGGCGATTACATCAAACAAGGGCTCATTGAATCCGGCTTTGTTGT
AGAATTAGTAAGGACTGGCCTGGATGGTCACCACAAATCGATGATTGGTGATTATGAATTAATCGTACTCGATGTAATGC
TGCCCGACATAGAAGGTTGGAAAATCCTGTCTTCATTGAGAGAGACTGGTAAATTTACACCCGTTCTTTTTTTAACCGCT
CGCGATCACGTTAATGACAGAGTCAAAGGACTTGAGTTAGGCGCAGACGATTATTTGGTTAAACCGTTTGCTTTCGCGGA
ACTCCTCGCAAGAGTGCGCACCTTGATCAGGAGAGGGACGTCTGTCCCTAACAACACGTTACACATTGCAGATTTGGAGC
TTGATATCCCTTCTCGCGTTGCGAAGCGCGGTGGCAAAGTAATCAATCTGACGACTAAAGAGTTTACATTGCTTGAACTA
ATGGTCAGACGTCAAGGTGAAGTATTGCCCCGTTCTTTGATCGCCTCTCAGGTATGGGACATGAATTTTGACAGTGACAC
GAATGTCATTGATGTCGCTATCCGAAGATTGCGCGCAAAAATTGATGATGACTTTCCTGTAAAGCTAATTCAAACTGTCA
GGGGGATGGGCTATAAAATGAGTGTAGATGATAGTAACGAATAA

Protein sequence : 
MKILVVEDEVKTGDYIKQGLIESGFVVELVRTGLDGHHKSMIGDYELIVLDVMLPDIEGWKILSSLRETGKFTPVLFLTA
RDHVNDRVKGLELGADDYLVKPFAFAELLARVRTLIRRGTSVPNNTLHIADLELDIPSRVAKRGGKVINLTTKEFTLLEL
MVRRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDDFPVKLIQTVRGMGYKMSVDDSNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-58 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-58 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator BAC0083 Protein 5e-71 65
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator BAC0111 Protein 5e-71 65
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator BAC0638 Protein 4e-63 63
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator BAC0197 Protein 7e-68 61
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator BAC0308 Protein 8e-66 61
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator BAC0347 Protein 8e-65 59
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator BAC0125 Protein 2e-63 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator VFG0596 Protein 6e-59 55
I607_01380 YP_008170346.1 two component response regulator transcriptional regulator VFG1390 Protein 3e-38 42