Gene Information

Name : I607_12580 (I607_12580)
Accession : YP_008172559.1
Strain : Alteromonas macleodii Ionian Sea U4
Genome accession: NC_021710
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2820216 - 2821355 bp
Length : 1140 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
GTGAACCACGATACGGTTAAAAACGATTATTATTGGATGGCAAAGGCCATTCAACTTGCCAAAAAAGGGCGCTTTACTAC
CTCGCCCAACCCCCGCGTTGGCTGCGTGATTGTTGACGAAGACAGTCAGTTGTTAGGCCAAGGTTATCACATCCAAGCGG
GCACACCTCATGCCGAAGTACACGCACTTAGACAAGCAGCTCATGCACGTTCTGAAGGTGCCAAAGGTGCAACCGCTTAC
GTTACCCTAGAGCCCTGCAGTCATTTTGGGCGTACGCCGCCTTGCGCTAAAGCCCTTGTTGAAGCGCAGGTTGCGCGAGT
TGTCATTGCTATGACTGACCCTAACCCGAACGTATGCGGCAACGGTATAAGTATGTTGCAAGAAGCGGGTATTGAAGTGG
TGAGCGAGGTAATGGCTGCAGAAGCCGCTGCGCTTAATCCCGGTTTTATAAAGCGTATGCTAACCGGTAAACCCTTTGTT
CGCGTAAAGTTGGGCATAAGTGTTGACGGAAAAATAGCCTTGCAAAACGGTGTGAGCCAATGGATTACCACTCCAGAAGC
CAGACGAGATGTACAGCACTATCGCGCACAAAGCTGTGTGGTGTTAACGGGGTCGGGTACAGTGAAGGCCGACAATCCTA
GCCTTTTAGTACGCGAGAAAGAGGCGCAGTTTGACGATTATCCCCTTGAACATGTTCGCCAGCCTGCTCGGGTTGTGCTA
GACAGTAAAAGCACGCTTAGTCGAGACTATGCGCTCTTTAATGACGGCAATATGACCTTTACTGCTACGTCTCAGGCTCA
CCCAGATACGGCAAGCCAGCATTACCTTCAGCTTGATGAAAAAGACGGTAAGCTTGACTTACACGCACTAATGTTGGCAT
TAGGCGATAAGCAATTTAACGAAGTATGGGTAGAAGCGGGGCCAGGCCTTGCCGGTGCACTCTTGCAAGAAGGGCTGGTG
GACGAGCTTATTTGTTACCAAGCGCCTAAGCTATTAGGTGATAAAGGGGTAAGTATGGTCAATTTGCCAGCGTTTACCGC
TTTAAATCAATCTATTTCACTTTCACTTATTGAAAATCGTCAGGTGGGTAACGATATTAAGCTTATCTTCCGGCCCGACG
TTAGCAACACCTGTCGCTAA

Protein sequence :
MNHDTVKNDYYWMAKAIQLAKKGRFTTSPNPRVGCVIVDEDSQLLGQGYHIQAGTPHAEVHALRQAAHARSEGAKGATAY
VTLEPCSHFGRTPPCAKALVEAQVARVVIAMTDPNPNVCGNGISMLQEAGIEVVSEVMAAEAAALNPGFIKRMLTGKPFV
RVKLGISVDGKIALQNGVSQWITTPEARRDVQHYRAQSCVVLTGSGTVKADNPSLLVREKEAQFDDYPLEHVRQPARVVL
DSKSTLSRDYALFNDGNMTFTATSQAHPDTASQHYLQLDEKDGKLDLHALMLALGDKQFNEVWVEAGPGLAGALLQEGLV
DELICYQAPKLLGDKGVSMVNLPAFTALNQSISLSLIENRQVGNDIKLIFRPDVSNTCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-61 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-61 47