Name : I607_01200 (I607_01200) Accession : YP_008170310.1 Strain : Alteromonas macleodii Ionian Sea U4 Genome accession: NC_021710 Putative virulence/resistance : Virulence Product : mannose-sensitive agglutinin biogenesis protein MshE Function : - COG functional category : - COG ID : - EC number : - Position : 268540 - 270252 bp Length : 1713 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGCAACCTCGATTAAAGATGCGCCTTGGCGATTTATTAGTCCATGAAAATATTGTTACCAGCGAACAGCTTGATAGCGC ATTATCGGCTCAGCGTTCATCAGGCCGAAAGCTCGGTGATACCCTTATCGACTTGGGGTTCATTAGCGAACCTCAACTGC TTCGTTTTCTTGCACAACAGCTCAACATTCCATTTTTAGATATTACACAACGCCGTATCGACCCTGAACAAGCGCAGCTT ATTCCTGAAGCCTATGCAAGGCGCTACCGCGCGCTGGTGCTCGAGGCTGATGATGAGGAAGTATTGCTAGGAATGAGCGA CCCTACCGATTTAGGAGGCCTTGACCAGCTGGGACCTTTAGTTGCACCTCGCCATATTGAGCTGGCAATTGTGCAGGAAA ATCAAATGCTCGAGGCTTTTGATTCAGTATACCGCCGTACCCAGGATATAGCGTCATTTGCAGAAAAGTTAGGTGAAGAG TACGCCGATGAAGCCGACTTTGAACTCTCTGCCTTAGACGATACCACTTCAGATGCCACCGTAGTAAAGCTACTTCATTC TATTTTTGAGGATGCGGTTCAGGTGCGAGCATCAGATATTCATATAGAGCCAGATGAAAAAATTCTTCGTATTCGCCAAC GTGTTGATGGGGTGTTACAGGAAAATACATTAAACCAAGTAAAGATTGCTTCGGCACTAGTACTTAGATTAAAGCTGATG TCGGGCTTAGATATCTCTGAAAAGCGCATACCGCAAGACGGCCGCTTCAATATCAAGGTAAAAGGCCACGTCCTCGATGT GCGTGTATCCACCATGCCGGTGGCAAATGGTGAAGCTGTAGTGATGCGTTTGCTAGACCAGTCTGCGGGCCTGTTAACGT TAGACCAAACGGGAATGCCCGATGTTATGGCGGAAAAGTTTCGCGCCGCTATCAACCGCCCTCACGGCATGATATTGGTA ACCGGGCCAACAGGGTCAGGTAAAACGACAACCTTGTACGGCGCACTAAGCGAGCTTAACAAACCTGATTTGAAAATTAT TACCGCTGAAGACCCCATTGAATACCGCTTACCTCGCATTAATCAAGTTCAGGTGAACAGCAAAATCGGCTTAGACTTCG CGGCTATTTTGCGTACCACACTTCGTCAAGACCCCGACATTATCATGGTGGGGGAAATGCGTGACCAAGAAACCGTTGAA ATTGGATTAAGAGGCGCGTTAACGGGCCACTTAGTATTGAGTACGCTTCACACCAATGACTCTGTAACCAGTGCTATTCG TCTTATTGATATGGGAGCGGCGCCCTATCTTGTGGCTACGTCGTTACGTGGTGTGTTAGCACAGCGACTTGTGCGTAGAG TGTGTGAGAACTGCAAGCAAGAAAAATTGCCTTCTGCGCAAGAACAAGCCTGGGTTGGCTTTTTAAAACCTGAACTTACA AACGCTAGTTTTTACAAGGGGCGAGGCTGTAACAGCTGTAATCATACCGGTTACAAAGGACGTATTGGTGTCTTTGAGTT CTTAGAAATGAATGAAGATATGATGGAAGCGCTGCGCGACGACAATACGCAGGGTTTTGTTGATGCAACAAAGGCAAACA AAGACTTTGTTCCGCTGTCTCATATGGCGCTAGATTATGCGGCAGAAGGCAAAACTTCTTTAGACGAAGTTTTCAAAGTG GCTGAGTTTGTACCAGAGGTGGTGAACCACTAA Protein sequence : MQPRLKMRLGDLLVHENIVTSEQLDSALSAQRSSGRKLGDTLIDLGFISEPQLLRFLAQQLNIPFLDITQRRIDPEQAQL IPEAYARRYRALVLEADDEEVLLGMSDPTDLGGLDQLGPLVAPRHIELAIVQENQMLEAFDSVYRRTQDIASFAEKLGEE YADEADFELSALDDTTSDATVVKLLHSIFEDAVQVRASDIHIEPDEKILRIRQRVDGVLQENTLNQVKIASALVLRLKLM SGLDISEKRIPQDGRFNIKVKGHVLDVRVSTMPVANGEAVVMRLLDQSAGLLTLDQTGMPDVMAEKFRAAINRPHGMILV TGPTGSGKTTTLYGALSELNKPDLKIITAEDPIEYRLPRINQVQVNSKIGLDFAAILRTTLRQDPDIIMVGEMRDQETVE IGLRGALTGHLVLSTLHTNDSVTSAIRLIDMGAAPYLVATSLRGVLAQRLVRRVCENCKQEKLPSAQEQAWVGFLKPELT NASFYKGRGCNSCNHTGYKGRIGVFEFLEMNEDMMEALRDDNTQGFVDATKANKDFVPLSHMALDYAAEGKTSLDEVFKV AEFVPEVVNH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-83 | 42 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-83 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
I607_01200 | YP_008170310.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG1876 | Protein | 2e-85 | 45 |
I607_01200 | YP_008170310.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG0182 | Protein | 6e-83 | 43 |
I607_01200 | YP_008170310.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG0233 | Protein | 1e-72 | 43 |
I607_01200 | YP_008170310.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG2048 | Protein | 6e-83 | 42 |