|
Name : lysS (I607_05615) Accession : YP_008171185.1 Strain : Alteromonas macleodii Ionian Sea U4 Genome accession: NC_021710 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1241899 - 1243467 bp Length : 1569 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACTGACCAACAAACAGACGATAACAAATTGATTGCAGAGCGCCGTGCCAAATTGAGCGCTATTCGCGAGCAGTGCCG TGCCAACGGTTTCCCAAACAGCTTCCGTCGTGAAAACTATGCGGATGAGCTGCAAGCTAAGTTCGGTGAATTCGACAAAG AAACCTTGCAAGAGCAGGGCAACAAGGTAAGCATTGCTGGCCGTATTATGGCAAAGCGTGGTCCTTTCATGTTGCTTCAA GACATGACAGGCCGTATTCAAGCTTACGCAGACAAAGACACGCAAAAAGCACTTAAAGCAAAATACGGTGCGCTAGATAT TGGTGACATCATTGGCGTAGCGGGCGACCTGCACAAGTCAGGTAAAGGCGACCTTTACGTAAACATGGAGCAATACGAGC TGCTAACAAAAGCACTTCGTCCGTTGCCAGAAAAATTCCACGGTTTGAGCGACCAGGAAACCAAGTATCGCCAGCGCTAT GTTGACTTGATCACAAGCGAACAAACCCGCAAAACCTTTATGATCCGCAGTAAAATTGTGAATGGTATTCGCAATTACCT GACCGAGCGTGACTACCTAGAAGTAGAAACGCCAATGCTACAGGTTATTCCAGGTGGCGCGACGGCGAAGCCGTTTGTCA CTCACCACAATGCGCTAGATATCGACATGTATCTGCGTATTGCGCCAGAGCTTTACCTTAAGCGTTTGGTTGTTGGTGGC TTTGAGCGTGTGTTCGAAATTAACCGAAACTTCCGTAACGAAGGCTTATCAACCCGTCATAACCCTGAGTTTACTATGCT TGAATTCTACCAAGCGTATGCAGACTACAACGACCTGATGAACCTTACCGAAGATATGCTGCGCACGTTAGCGGAAGACA TTCTTGGTACCAGCATTATCAAGAACACAACGAAAGACGCTGAAGGTAACGTAACGTCTGAAGTAGAGTATGACTTTGGT AAGCCGTTCGACCGTTTGAGCATGGGCGAGGCGATTCTTAAATACTGGCCTGAAGCTGATGAAGCCGCTATTCGCGACCC AGAAGCGAACCTAGATTCGCTTAAAGCGATGGCAAAGCAGCTTCATATCAAAGAGCCTGAAGTTGACGGTATTTGGGGCG CGGGTAAATACCTGTGCGAAATCTTCGAAGCAACAGCTGAAGAGAAGCTTGAACAACCTACGTTTATCACTGAATACCCT TGGGAAGTATCGCCGCTAGCACGTCGTAATGACAACAACCCGTTCATTACCGACCGTTTCGAGTTCTTCGTAGGCGGACG TGAATTAGCCAACGGCTTTAGCGAGCTTAACGACCCAGAAGACCAAGCTGAACGTTTTGCAAAGCAAGTTGAAGAAAAAG ACGCGGGCGATGATGAAGCCATGCACTTTGACGATGACTATATTCGTGCACTTGAGTACGGCTTACCGCCAACAGCGGGT GAGGGTATTGGTATCGACCGCCTAGCTATGCTATTTACCGATAGCTCAACTATCAAAGACGTTATCTTGTTCCCACATAT GAAGCCTCAAGCGCCGAAAGACGCGCAAGAAGCCGGTGAGCAAGCGTAA Protein sequence : MTDQQTDDNKLIAERRAKLSAIREQCRANGFPNSFRRENYADELQAKFGEFDKETLQEQGNKVSIAGRIMAKRGPFMLLQ DMTGRIQAYADKDTQKALKAKYGALDIGDIIGVAGDLHKSGKGDLYVNMEQYELLTKALRPLPEKFHGLSDQETKYRQRY VDLITSEQTRKTFMIRSKIVNGIRNYLTERDYLEVETPMLQVIPGGATAKPFVTHHNALDIDMYLRIAPELYLKRLVVGG FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNTTKDAEGNVTSEVEYDFG KPFDRLSMGEAILKYWPEADEAAIRDPEANLDSLKAMAKQLHIKEPEVDGIWGAGKYLCEIFEATAEEKLEQPTFITEYP WEVSPLARRNDNNPFITDRFEFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAG EGIGIDRLAMLFTDSSTIKDVILFPHMKPQAPKDAQEAGEQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-131 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008171185.1 | lysyl-tRNA ligase | VFG1668 | Protein | 2e-131 | 54 |
