Gene Information

Name : SABB_00879 (SABB_00879)
Accession : YP_008167993.1
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Virulence
Product : phage terminase small subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 936415 - 936984 bp
Length : 570 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGAGTGATTTAACAGCAAAACAAGCGCGTTTTGTGAATGAGTATATAAGAACACTTAATGTAACACAAAGTGCCATAAA
AGCAGGCTATAGCGCAAATAGCGCACATGTGACAGGGTGTAGGTTATTGAAGAAGCCACACATCAAGCAATATATACAAG
AACAAAAAGATAAGATTATAGATGAGAATGTATTAACCGCAAAAGAGTTACTACATGTGCTTACGAATGCGGCAGTCGGT
GATGAAACAGAAACGAAAGAAGTTGTAGTCAAGCGTGGAGAATATAAAGAGAATCCACAAAGTGGCAAAGTACAGCTAGT
CTATAACGAACATGTTGAACTGATAGAGGTACCAATTAAGCCTAGTGATCGTTTAAAAGCTCGTGATATGTTGGGGAAAT
ACTATAAGTTATTTACAGATAAGCATGATATTAACGGCAATGTGCCTATATTCATTAACATTGGTGAATGGGACGGAGAC
GATGAGGAATTAGATAAGGCAGTGAAAGATGTATCTAACGCTAATCCTAATCATACTGTGATTGTGGATGATATACCGTT
AGAGGATTAA

Protein sequence :
MSDLTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVG
DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYYKLFTDKHDINGNVPIFINIGEWDGD
DEELDKAVKDVSNANPNHTVIVDDIPLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0906 YP_185777.1 phage terminase Not tested vSa1 Protein 2e-83 99
SAV0800 NP_371324.1 bacteriophage terminase small subunit Not tested vSa3 Protein 7e-84 99
unnamed AAG29602.1 Orf5 Not tested SaPIbov Protein 1e-83 98
SAB0359 YP_415861.1 pathogenicity island protein Not tested SaPIbov Protein 2e-83 98
SAR0382 YP_039839.1 terminase small subunit Not tested SaPI4 Protein 9e-84 98
unnamed AAL04127.1 unknown Not tested SaPI3 Protein 9e-81 98
unnamed AET14346.1 terminase small subunit Virulence SaPI68111 Protein 2e-83 97
ter ABJ97289.1 terminase Not tested SaPI2 Protein 2e-83 97
SAAV_0805 YP_003281728.1 pathogenicity island protein ORF5; phage terminase family protein Not tested SaPIAv Protein 7e-83 97
SACOL2014 YP_186834.1 phage terminase Not tested vSa4 Protein 8e-82 97
ter AAL67611.1 terminase Not tested SaPI1 Protein 3e-83 96
SAV2012 NP_372536.1 bacteriophage terminase small subunit Not tested vSa4 Protein 4e-83 96
SA1820 NP_375121.1 hypothetical protein Not tested vSa4 Protein 4e-83 96
MW1949 NP_646766.1 hypothetical protein Not tested vSa4 Protein 1e-81 96
unnamed AAP55238.1 bacteriophage terminase small subunit Not tested SaPIbov2 Protein 1e-67 72