Gene Information

Name : tnpB (SABB_05208)
Accession : YP_008167242.1
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Unknown
Product : transposase TnpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 82744 - 84636 bp
Length : 1893 bp
Strand : -
Note : identified by sequence similarity; putative

DNA sequence :
ATGAATGCTTCTAGTAAAAGGAAAATTATCAGTCAGAGTGAGATCAGCAAAAAAATAGCTGTAATGAATGAAGAAATGCA
AGGGTTTTGGGCTAATAATAGTTGGGATATAAGAAAATGTCCACATCCTTCTGCCATAGAATTAAGTAAGAATCCTGCTT
TAAGAAATCGTTGGGTTCGTTTTGAACGTGTTAAAAATCTGTGGTTAAGAACAGAATTGAAATATTTTTATTTTTACCAT
TTAAACAATGGAATATGGAATGCAAAAACTGTCTGGATTAGAAAAGGAACAGTAATTAATAAAATGTTGGATTTTTTAGA
TTTAAAGTATCCCAGCATTACTTCAATTACTGAAGTTCCTATTGATAAAGCAATGACGGAGTATAGAACATATTTGACAA
AACAGGGTGTTAGAATTACCACCACTAATTATAAGATTACTGCTAATCAAGAAAAAACACCTGTAAAAGCTAATTCTTAC
TATGTTACTAATCTTAAACAATTTATTGAGTTTTATGAGGATTTTTATTTTGATGGAGAGGAGTGGGATAAAGACGTTTG
GGATAGACGAAACTTACCTTTGCCAGATGATAAGGTTAACCCAACACAATATGAATATACAATTAACTTTAAAGGGTTTC
GGAATACATATTTTAAACAGCTTGTAAAAAGATATTGTAAGTTAAGATTGAACATGGATAGCTTTTCCTATGTAAGTGAT
ATTGCCCAAAAACTTAAAGAGTTCTTTAATTTTCTGGACATAAAGTTTAAACACGTTCAGAGAGTACACCAATTAACGAG
AGTGGAAATTGAAGCATATTTAAGTGAACTAAACATGATGGGGATAAAACCTAGTACAATAACTGGGAGGATCTCTATAT
TGGAAGGACTATTTAGTACCCTTCATAGGCTAGAATGGGATGATGTTCCTTCCAAATTATTAATTTATCCCGAGGACTAT
CCGAAAATACCAAGAGCAAAACCTCGCTTTATAGACGAATTCGTTCTAGAGCAATTGAACAGTCATCTTGATAAATTACC
CGAATATATAGCTACGATGACTATGATTGTTCAAGAATGTGGAATGAGGATAAGTGAATTGTGCACCTTGAAAAAAGGCT
GTTTATTAGAGGACAAAGATGGAGATTACTTTTTAAAGTATTATCAATGGAAAATGAAAAAGAAGCATATAGTTCCAATA
TCTAAAGAGGTAGCTTTACTTATTAAAGTTCGGGAAGATAAAGTTTCAGAGGAATTTCCAGATAGTGAATACCTCTTTCC
AAGAAAAGATGGATCGCCATTAAAACAAGAAACATTTAGAGGTGAGTTAAATAAATTAGCTTATGAGCAAAATATAGTGG
ATAAATCAGGTGAGATTTATAGATTCCATGCCCATGCCTTTCGCCATACAGTAGGAACAAGAATGATTAACAACGGGGTG
CCCCAGCATATTGTGCAGAAATTTTTGGGACATGAAAGCCCAGAAATGACAAGCAGATACGCTCATATCTTTGATGAAAC
TCTAAAAAATGAATTTACTAAATTTCAAGAAAAACTGGTTACCAATAATGGAGATGTGCTCAATCTAGATGATGATAGTG
AAGTCGATGATGTAGAGCTTCAATGGTTCAAGAAAAATATAAATGCACAAGTGCTTCCAAATGGTTATTGTAGATTGCCA
GTAATAGCAGGTGGTTGTCCACATGCGAATGCATGCTTAGATTGCACTCACTTCTGTACCAGTAAGCAATTCTTACCACA
GCACGAAGAACAGTTAGAGCGTACAGAAGAGTTATTAGCCATAGCTAAGGATAAACAATGGCAAAGACAAGTAGAGACTA
ATAGCCGTGTTAAAGAGCGTTTAGAACAAATCATTGGAAGTTTGACGGGGTAA

Protein sequence :
MNASSKRKIISQSEISKKIAVMNEEMQGFWANNSWDIRKCPHPSAIELSKNPALRNRWVRFERVKNLWLRTELKYFYFYH
LNNGIWNAKTVWIRKGTVINKMLDFLDLKYPSITSITEVPIDKAMTEYRTYLTKQGVRITTTNYKITANQEKTPVKANSY
YVTNLKQFIEFYEDFYFDGEEWDKDVWDRRNLPLPDDKVNPTQYEYTINFKGFRNTYFKQLVKRYCKLRLNMDSFSYVSD
IAQKLKEFFNFLDIKFKHVQRVHQLTRVEIEAYLSELNMMGIKPSTITGRISILEGLFSTLHRLEWDDVPSKLLIYPEDY
PKIPRAKPRFIDEFVLEQLNSHLDKLPEYIATMTMIVQECGMRISELCTLKKGCLLEDKDGDYFLKYYQWKMKKKHIVPI
SKEVALLIKVREDKVSEEFPDSEYLFPRKDGSPLKQETFRGELNKLAYEQNIVDKSGEIYRFHAHAFRHTVGTRMINNGV
PQHIVQKFLGHESPEMTSRYAHIFDETLKNEFTKFQEKLVTNNGDVLNLDDDSEVDDVELQWFKKNINAQVLPNGYCRLP
VIAGGCPHANACLDCTHFCTSKQFLPQHEEQLERTEELLAIAKDKQWQRQVETNSRVKERLEQIIGSLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47606.1 transposase B of Transposon Tn554 Not tested Type-III SCCmec Protein 0.0 99
tnpB BAC57471.1 transposase B Not tested Type-IIIinv SCCmec Protein 0.0 99
tnpB NP_373291.1 transposase B for Tn554 Not tested Type-II SCCmec Protein 0.0 98
tnpB-3 YP_190049.1 transposase B Not tested Type-II SCCmec Protein 0.0 98
tnpB BAC57490.1 transposaseB Not tested Type-IIIinv SCCmec Protein 0.0 98
tnpB BAB47666.1 transposase B(Tn554) Not tested Type-III SCCmec Protein 0.0 98
tnpB BAC53828.1 transposase B(Tn554) Not tested SRImec-III and SCCmec-III region Protein 0.0 98
tnpB BAA82202.1 transposaseB Not tested Type-II SCCmec Protein 0.0 98
tnpB1 YP_039525.1 transposase B 1 Not tested Type-II SCCmec Protein 0.0 98
tnpB NP_370579.1 transposase B Not tested Type-II SCCmec Protein 0.0 98