Name : SABB_01782 (SABB_01782) Accession : YP_008167216.1 Strain : Staphylococcus aureus Bmb9393 Genome accession: NC_021670 Putative virulence/resistance : Unknown Product : Type I restriction enzyme HindVIIP R-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 55615 - 57804 bp Length : 2190 bp Strand : - Note : identified by sequence similarity; putative DNA sequence : ATGGTCTTTTTCTCTGGAAAATTAATTCAAATGCTTAATAATCCTACCTTAGTTGTCGTAACAGATCGTAATGATTTAGA TAACCAACTATACAGTACGTTTGTTAAATCGAAAGGACGGTCTGGTAAAGGTTTATTAAGACAAACACCAAAACAAGCTG AAACACGTAAAGAATTAAAATCGTTATTATCTGTTGAGTCGGGCGGTATTGTATTTACAACGATGCAAAAATTTGAACCT GAACAAAACGAAACGACCATGTCTGCTCTAACAGAACGTAAAAATGTGATTGTTATGGCAGATGAAGCGCATCGTACACA ATATGGTTTTAATGCAAAATACGATGATAAAGGGGAAGGCATTAAATATGGTTATGCGAAGTATTTAAGAGATGCTTTAC CGAATGCGACGTTTGTAGGATTTACGGGCACGCCCGTAGCTTCAACGGATAAAAATACGCAAATGGTCTTTGGGAACTAT ATCGATGTTTATGATATGACACAAGCCGTAGCTGATGGAAGTACGGTGAAAATTTACTATGAAAGTCGCATAATTCCATT AAATTTACCTCAAAATTTAGACTTAGACGAAGCATATAATGACATTACAGAGGATCAAGAAGAGGATGTAAAACAGCGTT TAAAATCAAAATGGTCACGAATTGAAGCCTTAGCAGGCGCAAAACCTCGTGTAGAAGCTTTAGCCAAAGACATCATCCAA CATTTTGAAACACGTCAGCAAGCGATGAAAGGTAAAGGAATGATCGTAACGATGAGTCGTCGAATTGCTGTTGATTTATA CGATGAAATCATTCGTCTAAAACCAGAATGGCATTCAGATGATGATGATAAAGGGGTCATTAAAGTGGTGATGACTGGCT CATCTAGTGACCCAACTTCTTTCCAAAGACATATTGGTCCTAAAAAACGTCGTAATTTATTAGAAAAACGTATGAAAGAT ATGAATGATGAATTACAACTCGTGATTGTTCGAGATATGTGGCTCACAGGATTTGATGTACCTTCCATGCATACCATGTA TATCGATAAACCGATGAAAGGTCATAATTTAATGCAAGCGATTGCTCGTGTCAATCGAGTGTTTAAAGATAAACCGGGTG GATTGATTGTCGATTATGTGGGTATCGCTGAAAGTTTAAAAGAGGCACTTAAAGAATATACAGAATCTGATCAAGCACAA ACGGCGATAGATACAGATAAAGCGGTTGAATTGATGTTATTGAAATATGATGTGATTCAAGATATGTTATATAATCTTGA CTATTCTAAGTTTAATTCAGAGAAAAAGTCTGAACGTTATTATGCGATTTCAGATACGATGGATTATGTGATTGGTTTAG GCGAAGATGAACGCCAGCGTTTTATTAAAACGGTCACAGAGTTAGGGAAAGCTTTTGCGCTTTGTGCGACTGAACCTACA GCCCAAGAACTCAATGATGAAATTGCCTTCTTTAAAGCAGTTAAAGCAGGACTTGTTAAATTGTTACAACCGCCAAAAGA AGGAAAAACACGTAAAACACCTGCAGAAGTTGAAGCAGAGATTAATCAACTTGTGTCACAATCTGTTGTGACAGAAGATG TGATTGATGTTTACCAAACACTAGGTCTTGAACAACCCGATTTATCAATCCTATCAGATGACTTCCTAAAAGATGTCGAA GGATTGAAACAAAAAAATGTTGCGGTAGAATTATTAAATCGATTACTCAAAGGGCAAGTAAAATCATTAATGAAAACGAA CGCGACAGTATCTAAGCGTTTCTCTGAAATGTTAGGAAATTCGATTAATAAATATAATAGCCGTTCTATTGAAACATCAA AAGTGATTGAAGAACTCATTCAACTCGCTAAAGATATTAAACAAGAACAACAACGAGGAAATGAATTAGGCCTGAATTCA GATGAGATTGCGTTTTACGATGCTTTAGCTTCACATGAAACAGCAAAAGAAGCCATGGGAGATAAAGAACTACGTGCGAT TGCTCATGAGCTAACTAAAACAGTGAAAGAAAACATGGGTGTTGATTGGTCTAAACGCGATAGCGCAAAAGCTAAAATGC GCGTAGCTGTTAGACGATTGCTTAAAAAATATGGCTATCCACCAGATTTACAAAAAATGGCTGTAGAGCAGGTTGTAGAG CAAGCAGAACTTATGGCGAGTAATCAGTAA Protein sequence : MVFFSGKLIQMLNNPTLVVVTDRNDLDNQLYSTFVKSKGRSGKGLLRQTPKQAETRKELKSLLSVESGGIVFTTMQKFEP EQNETTMSALTERKNVIVMADEAHRTQYGFNAKYDDKGEGIKYGYAKYLRDALPNATFVGFTGTPVASTDKNTQMVFGNY IDVYDMTQAVADGSTVKIYYESRIIPLNLPQNLDLDEAYNDITEDQEEDVKQRLKSKWSRIEALAGAKPRVEALAKDIIQ HFETRQQAMKGKGMIVTMSRRIAVDLYDEIIRLKPEWHSDDDDKGVIKVVMTGSSSDPTSFQRHIGPKKRRNLLEKRMKD MNDELQLVIVRDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLIVDYVGIAESLKEALKEYTESDQAQ TAIDTDKAVELMLLKYDVIQDMLYNLDYSKFNSEKKSERYYAISDTMDYVIGLGEDERQRFIKTVTELGKAFALCATEPT AQELNDEIAFFKAVKAGLVKLLQPPKEGKTRKTPAEVEAEINQLVSQSVVTEDVIDVYQTLGLEQPDLSILSDDFLKDVE GLKQKNVAVELLNRLLKGQVKSLMKTNATVSKRFSEMLGNSINKYNSRSIETSKVIEELIQLAKDIKQEQQRGNELGLNS DEIAFYDALASHETAKEAMGDKELRAIAHELTKTVKENMGVDWSKRDSAKAKMRVAVRRLLKKYGYPPDLQKMAVEQVVE QAELMASNQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 99 |
hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 99 |
hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 98 |
api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 1e-175 | 49 |