Gene Information

Name : SABB_01782 (SABB_01782)
Accession : YP_008167216.1
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Unknown
Product : Type I restriction enzyme HindVIIP R-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 55615 - 57804 bp
Length : 2190 bp
Strand : -
Note : identified by sequence similarity; putative

DNA sequence :
ATGGTCTTTTTCTCTGGAAAATTAATTCAAATGCTTAATAATCCTACCTTAGTTGTCGTAACAGATCGTAATGATTTAGA
TAACCAACTATACAGTACGTTTGTTAAATCGAAAGGACGGTCTGGTAAAGGTTTATTAAGACAAACACCAAAACAAGCTG
AAACACGTAAAGAATTAAAATCGTTATTATCTGTTGAGTCGGGCGGTATTGTATTTACAACGATGCAAAAATTTGAACCT
GAACAAAACGAAACGACCATGTCTGCTCTAACAGAACGTAAAAATGTGATTGTTATGGCAGATGAAGCGCATCGTACACA
ATATGGTTTTAATGCAAAATACGATGATAAAGGGGAAGGCATTAAATATGGTTATGCGAAGTATTTAAGAGATGCTTTAC
CGAATGCGACGTTTGTAGGATTTACGGGCACGCCCGTAGCTTCAACGGATAAAAATACGCAAATGGTCTTTGGGAACTAT
ATCGATGTTTATGATATGACACAAGCCGTAGCTGATGGAAGTACGGTGAAAATTTACTATGAAAGTCGCATAATTCCATT
AAATTTACCTCAAAATTTAGACTTAGACGAAGCATATAATGACATTACAGAGGATCAAGAAGAGGATGTAAAACAGCGTT
TAAAATCAAAATGGTCACGAATTGAAGCCTTAGCAGGCGCAAAACCTCGTGTAGAAGCTTTAGCCAAAGACATCATCCAA
CATTTTGAAACACGTCAGCAAGCGATGAAAGGTAAAGGAATGATCGTAACGATGAGTCGTCGAATTGCTGTTGATTTATA
CGATGAAATCATTCGTCTAAAACCAGAATGGCATTCAGATGATGATGATAAAGGGGTCATTAAAGTGGTGATGACTGGCT
CATCTAGTGACCCAACTTCTTTCCAAAGACATATTGGTCCTAAAAAACGTCGTAATTTATTAGAAAAACGTATGAAAGAT
ATGAATGATGAATTACAACTCGTGATTGTTCGAGATATGTGGCTCACAGGATTTGATGTACCTTCCATGCATACCATGTA
TATCGATAAACCGATGAAAGGTCATAATTTAATGCAAGCGATTGCTCGTGTCAATCGAGTGTTTAAAGATAAACCGGGTG
GATTGATTGTCGATTATGTGGGTATCGCTGAAAGTTTAAAAGAGGCACTTAAAGAATATACAGAATCTGATCAAGCACAA
ACGGCGATAGATACAGATAAAGCGGTTGAATTGATGTTATTGAAATATGATGTGATTCAAGATATGTTATATAATCTTGA
CTATTCTAAGTTTAATTCAGAGAAAAAGTCTGAACGTTATTATGCGATTTCAGATACGATGGATTATGTGATTGGTTTAG
GCGAAGATGAACGCCAGCGTTTTATTAAAACGGTCACAGAGTTAGGGAAAGCTTTTGCGCTTTGTGCGACTGAACCTACA
GCCCAAGAACTCAATGATGAAATTGCCTTCTTTAAAGCAGTTAAAGCAGGACTTGTTAAATTGTTACAACCGCCAAAAGA
AGGAAAAACACGTAAAACACCTGCAGAAGTTGAAGCAGAGATTAATCAACTTGTGTCACAATCTGTTGTGACAGAAGATG
TGATTGATGTTTACCAAACACTAGGTCTTGAACAACCCGATTTATCAATCCTATCAGATGACTTCCTAAAAGATGTCGAA
GGATTGAAACAAAAAAATGTTGCGGTAGAATTATTAAATCGATTACTCAAAGGGCAAGTAAAATCATTAATGAAAACGAA
CGCGACAGTATCTAAGCGTTTCTCTGAAATGTTAGGAAATTCGATTAATAAATATAATAGCCGTTCTATTGAAACATCAA
AAGTGATTGAAGAACTCATTCAACTCGCTAAAGATATTAAACAAGAACAACAACGAGGAAATGAATTAGGCCTGAATTCA
GATGAGATTGCGTTTTACGATGCTTTAGCTTCACATGAAACAGCAAAAGAAGCCATGGGAGATAAAGAACTACGTGCGAT
TGCTCATGAGCTAACTAAAACAGTGAAAGAAAACATGGGTGTTGATTGGTCTAAACGCGATAGCGCAAAAGCTAAAATGC
GCGTAGCTGTTAGACGATTGCTTAAAAAATATGGCTATCCACCAGATTTACAAAAAATGGCTGTAGAGCAGGTTGTAGAG
CAAGCAGAACTTATGGCGAGTAATCAGTAA

Protein sequence :
MVFFSGKLIQMLNNPTLVVVTDRNDLDNQLYSTFVKSKGRSGKGLLRQTPKQAETRKELKSLLSVESGGIVFTTMQKFEP
EQNETTMSALTERKNVIVMADEAHRTQYGFNAKYDDKGEGIKYGYAKYLRDALPNATFVGFTGTPVASTDKNTQMVFGNY
IDVYDMTQAVADGSTVKIYYESRIIPLNLPQNLDLDEAYNDITEDQEEDVKQRLKSKWSRIEALAGAKPRVEALAKDIIQ
HFETRQQAMKGKGMIVTMSRRIAVDLYDEIIRLKPEWHSDDDDKGVIKVVMTGSSSDPTSFQRHIGPKKRRNLLEKRMKD
MNDELQLVIVRDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLIVDYVGIAESLKEALKEYTESDQAQ
TAIDTDKAVELMLLKYDVIQDMLYNLDYSKFNSEKKSERYYAISDTMDYVIGLGEDERQRFIKTVTELGKAFALCATEPT
AQELNDEIAFFKAVKAGLVKLLQPPKEGKTRKTPAEVEAEINQLVSQSVVTEDVIDVYQTLGLEQPDLSILSDDFLKDVE
GLKQKNVAVELLNRLLKGQVKSLMKTNATVSKRFSEMLGNSINKYNSRSIETSKVIEELIQLAKDIKQEQQRGNELGLNS
DEIAFYDALASHETAKEAMGDKELRAIAHELTKTVKENMGVDWSKRDSAKAKMRVAVRRLLKKYGYPPDLQKMAVEQVVE
QAELMASNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdR BAD24840.1 type I restriction-modification system endonuclease homologue Not tested Type-V SCCmec Protein 0.0 99
hsdR BAH57699.1 type I restriction-modification system endonuclease homologue Not tested Type-VII SCCmec Protein 0.0 99
hsdR YP_251977.1 type I restriction-modification system restriction subunit Not tested SCCmec Protein 0.0 98
api52 CAF28526.1 hsdr-like Type I restriction enzyme Not tested YAPI Protein 1e-175 49