Gene Information

Name : tnpC (SABB_05289)
Accession : YP_008167206.1
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Unknown
Product : transposase TnpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 47359 - 47736 bp
Length : 378 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGGATAAACAAGTTAGAAATACAACAGAAATTGTACGTTTGGCGAAGCAGAAATCAAAAAAGACAAGGGAAAAAGTAGA
CAAAGCGATTTCTAAATTTTCGATTGAAGGTAAAGTTATTAATTTTAATTCAATAGCAAAGGAAGCTAATGTTTCTAAAT
CATGGCTTTATAAGGAACACGATATTAGGCAAAGAATCGAATCCCTTCGTGAGCGTCAAATAACAGCAAATGTAGTCTCA
AAACCCAAGAAAAGTTCTCGTTCGGAGGAAATCCTTATTAAAACCTTAAAAAGAAGAGTAATGGAATTAGAAAAAGAAAA
TAAAAAATTACAGAACCAAATTCAAAAATTATATGGAGATCTGTATAATAAAGAATAA

Protein sequence :
MDKQVRNTTEIVRLAKQKSKKTREKVDKAISKFSIEGKVINFNSIAKEANVSKSWLYKEHDIRQRIESLRERQITANVVS
KPKKSSRSEEILIKTLKRRVMELEKENKKLQNQIQKLYGDLYNKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC BAA82203.1 transposaseC Not tested Type-II SCCmec Protein 2e-51 100
tnpC NP_370578.1 transposase C Not tested Type-II SCCmec Protein 2e-51 100
tnpC NP_373290.1 transposase for Tn554 Not tested Type-II SCCmec Protein 2e-51 100
tnpC-3 YP_190050.1 transposase C Not tested Type-II SCCmec Protein 2e-51 100
tnpC BAB47665.1 transposase C(Tn554) Not tested Type-III SCCmec Protein 2e-51 100
tnpC BAC53827.1 transposase C(Tn554) Not tested SRImec-III and SCCmec-III region Protein 2e-51 100
tnpC BAC57472.1 transposase C Not tested Type-IIIinv SCCmec Protein 2e-51 100
tnpC1 YP_039524.1 transposase C 1 Not tested Type-II SCCmec Protein 2e-51 100
unnamed BAB47607.1 transposase C of Transposon Tn554 Not tested Type-III SCCmec Protein 1e-50 97
tnpC BAC57489.1 transposaseC Not tested Type-IIIinv SCCmec Protein 1e-50 97