Gene Information

Name : kdpB (SABB_02405)
Accession : YP_008169193.1
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Unknown
Product : Potassium-transporting ATPase B chain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2280866 - 2282902 bp
Length : 2037 bp
Strand : -
Note : identified by sequence similarity; putative

DNA sequence :
ATGGAAAAAATGCATCATGTAAATAAATATTTCAATCAAACAATGGTGATAGAAGCTTTGAAAATGAGTTTTTATAAGCT
GAATCTTAAACAATTAATAAAAAATCCGATAATGTTTGTCGTTGAGGTTGGAATGATTTTAACGTTGATATTAATATGTT
TTCCTGACATATTTGGAACTAGCTATCTATCGCGAGGTTATTTGATTACAATTTTTATCATATTATTAATAACTATATTG
TTTGCTAATTTTTCAGAAGCCTTTGCTGAAGGTCGTGGAAAAGCGCAAGCTGATAGTTTAAGACAAGCACAATCAAATTT
AACTGCTCGATTGATAGAAGAAAATGGTGCGTATCGGATAGTGAACGCCACAGAGTTAAAAGCCGGACAAAATATTCGGG
TAGAAAATGGAGAAACAATCCCTGCTGATGGCGTTGTAATAAATGGATTAGCAACCGTTGATGAATCTGCAATTACTGGT
GAGTCTGCACCTGTGATAAAAGAATCAGGTGGCGATTTTGATGGAGTCATTGGCGGTACACTTGTAACATCTGATTGGTT
AGAAATACGTGTTGAGAGTGAAGCGGGTACATCTTTTTTAGATAAAATGATTGCCTTAGTTGAAGGGGCGGAAAGAAATA
AAACACCAAATGAAATTGCACTTTTTACATTATTAACAACGTTAACAATTATATTTTTAGTCGTTATTGTAACGTTATAT
CCAATAGCATCTTACCTGCATTTAATTTTACCTATTGCGATGCTCATTGCGTTAACAGTATGTTTAATACCAACGACAAT
CGGTGGTTTGTTATCGGCGATTGGTATTGCAGGCATGGATCGTGTTACTCAATTCAATGTATTAGCGAAAAGTGGGCGTG
CTGTAGAAGTATGTGGAGATGTCGATGTAATGATTTTAGACAAGACAGGCACAATCACTTATGGCAATCGAATCGCTAGT
GAATTTTTACCAGTGAATCAACAAATGCTTGAAAAATTGATAGTCGCTGCTTATATGTCATCAATCTACGATGATACGCC
AGAAGGAAAAAGTATTGTACGATTAGCGAAGCAGATGTATATAAATGAGCTGCCTAAAGACATTGATGGCACATATAAGC
CTTTTACAGCTGAAACTAGAATGAGCGGAATCATTACAAATGAAATATCGGTATTCAAAGGTGCACCTAATAGTATGATA
AATCTTGTCAAACAACAACAAGGCAATATTCCTCTTAATATTGAGTCTCTCTGTATGGATGTATCGAGTAAAGGTGGCAC
ACCATTAATAGTCATTGAAAACAATGTCATGCTTGGCGTGATTTATTTAAAAGATGTGATTAAAGATGGTCTTGTAGAAC
GATTTACTGAATTGAGAAAAATGGGGATTGAAACAGTTATGTGTACAGGTGATAATGCTTTAACAGCAGCTACAATTGCA
AAAGAAGCCGGGGTTGATAGATTTGTTGCAGAGTGTAAACCCGAAGATAAAATTAAAGTCATCAAAGATGAACAAGCGAA
AGGCCATATTGTTGCGATGACAGGAGATGGTACAAATGATGCACCTGCGCTAGCACAAGCGAATATAGGATTAGCTATGA
ACTCAGGGACAATTAGTGCTAAAGAGGCAGCTAATCTAATTGATTTAGATTCGAATCCTACAAAGTTAATAGAGGTTGTA
AAAATAGGCAAACAATTATTAATGACGAGAGGTGCATTAACGACATTTAGTTTGGCTAATGACGTAGCAAAATACTTTGC
AATTTTACCTGCACTAATGATGTCAACAATTCCAGAAATGACTTCACTAAATATTATGCATTTATCGTCACCTAAATCTG
CAATTATATCAGCTTTGATATTCAATGCATTAATCATTGTTGCCTTAATTCCAATTGCCATGAAAGGTGTAAAAGTAAAG
GGTTACAGCATTGATAGAATCTTTATAAATAATATGTTGATTTATGGATTAGGTGGATTAATCGTCCCGTTTTTAGGCAT
TAAATTAATAGATATGATTGTACAATTTTTTGTGTAA

Protein sequence :
MEKMHHVNKYFNQTMVIEALKMSFYKLNLKQLIKNPIMFVVEVGMILTLILICFPDIFGTSYLSRGYLITIFIILLITIL
FANFSEAFAEGRGKAQADSLRQAQSNLTARLIEENGAYRIVNATELKAGQNIRVENGETIPADGVVINGLATVDESAITG
ESAPVIKESGGDFDGVIGGTLVTSDWLEIRVESEAGTSFLDKMIALVEGAERNKTPNEIALFTLLTTLTIIFLVVIVTLY
PIASYLHLILPIAMLIALTVCLIPTTIGGLLSAIGIAGMDRVTQFNVLAKSGRAVEVCGDVDVMILDKTGTITYGNRIAS
EFLPVNQQMLEKLIVAAYMSSIYDDTPEGKSIVRLAKQMYINELPKDIDGTYKPFTAETRMSGIITNEISVFKGAPNSMI
NLVKQQQGNIPLNIESLCMDVSSKGGTPLIVIENNVMLGVIYLKDVIKDGLVERFTELRKMGIETVMCTGDNALTAATIA
KEAGVDRFVAECKPEDKIKVIKDEQAKGHIVAMTGDGTNDAPALAQANIGLAMNSGTISAKEAANLIDLDSNPTKLIEVV
KIGKQLLMTRGALTTFSLANDVAKYFAILPALMMSTIPEMTSLNIMHLSSPKSAIISALIFNALIIVALIPIAMKGVKVK
GYSIDRIFINNMLIYGLGGLIVPFLGIKLIDMIVQFFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 0.0 72
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 0.0 72
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 0.0 72
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 0.0 72
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 0.0 72
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 0.0 72
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-129 55
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-129 55