Gene Information

Name : SABB_02378 (SABB_02378)
Accession : YP_008169102.1
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Unknown
Product : putative phage major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2188352 - 2189497 bp
Length : 1146 bp
Strand : -
Note : identified by sequence similarity; putative

DNA sequence :
ATGACTATAAATTTATCGGAAACATTCGCAAATGCGAAAAACGAATTTATTAATGCAGTAAACAACGGTGAACCGCAAGA
AAGACAAAATGAATTGTACGGTGACATGATTAACCAACTATTTGAAGAAACTAAATTACAAGCAAAAGCAGAAGCTGAAA
GAGTTTCTAGTTTACCTAAATCAGCACAATCTTTGAGTGCAAACCAAAGAAGTTTCTTCATGGATATCAATAAAAACGTT
AACTATAAAGAAGAAAAACTTTTGCCAGAAGAAACAATTGATAGAATTTTTGAAGATTTGACGACGAATCATCCGTTATT
AGCTGATTTAGGTATTAAAAACGCTGGTTTGCGTTTGAAGTTCTTAAAATCTGAAACTTCTGGCGTAGCCGTTTGGGGTA
AAATCTATGGTGAAATTAAAGGTCAATTAGATGCTGCGTTCAGTGAAGAAACAGCAATTCAAAATAAATTGACAGCGTTT
GTTGTTTTACCAAAAGATTTAAATGATTTTGGTCCTGCGTGGATTGAAAGATTTGTTCGTGTTCAAATCGAAGAAGCATT
TGCAGTGGCGCTTGAAACTGCGTTCTTAAAAGGTACTGGTAAAGACCAACCAATCGGCTTAAACCGTCAAGTACAAAAAG
GTGTATCGGTAACTGAGGGTGCTTATCCAGAGAAAGAAGAACAAGGTACGCTTACATTTGCTAATCCGCGCGCTACGGTT
AATGAATTGATGCAAGTGTTTAAATACCACTCAACTAACGAGAAAGGTAAATCAGTAGCGGTTAAAGGTAATGTAACAAT
GGTTGTTAATCCGTCCGATGCTTTTGAGGTTCAAGCACAGTATACACATTTAAATGCAAATGGCGTATATGTTACTGCTT
TACCATTTAATTTGAATGTTATCGAGTCTACAGTCCAAGAAGCAGGTAAGGTTTTAACGTACGTTAAAGGTTTATATGAT
GGTTATTTAGCTGGTGGTATTAATGTTCAGAAATTTAAAGAAACACTTGCGTTAGATGATATGGATTTATACACTGCAAA
ACAATTTGCTTACGGCAAAGCGAAAGATAATAAAGTTGCTGCTGTTTGGAAATTAGATTTAAAAGGACATAAGCCAGCTT
TAGAAGGTACCGAAGAAACACTATAA

Protein sequence :
MTINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEETKLQAKAEAERVSSLPKSAQSLSANQRSFFMDINKNV
NYKEEKLLPEETIDRIFEDLTTNHPLLADLGIKNAGLRLKFLKSETSGVAVWGKIYGEIKGQLDAAFSEETAIQNKLTAF
VVLPKDLNDFGPAWIERFVRVQIEEAFAVALETAFLKGTGKDQPIGLNRQVQKGVSVTEGAYPEKEEQGTLTFANPRATV
NELMQVFKYHSTNEKGKSVAVKGNVTMVVNPSDAFEVQAQYTHLNANGVYVTALPFNLNVIESTVQEAGKVLTYVKGLYD
GYLAGGINVQKFKETLALDDMDLYTAKQFAYGKAKDNKVAAVWKLDLKGHKPALEGTEETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAKOR_01942 YP_008492130.1 Major capsid protein Not tested ¥ÕSa3 Protein 5e-174 99
SAV1963 NP_372487.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-174 99
SA1774 NP_375072.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-174 99
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 5e-174 99
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 5e-174 99
SAOV_1104 YP_005736599.1 Phage major capsid protein Not tested ¥ÕSa2 Protein 1e-165 92
SH1772 YP_253687.1 hypothetical protein Not tested ¥ÕSh1 Protein 1e-84 49