Gene Information

Name : tnpB1 (SABB_05256)
Accession : -
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1840838 - 1842678 bp
Length : 1841 bp
Strand : -
Note : transposase TnpB;transposase TnpA

DNA sequence :
ATGAATGCTTCTAGTAAAAGGAAAATTATTAGTCAGAGTGAGATTAGCAAAAAAATAGCTGTAATGAATGAAGAAATGCA
GGGGTTTTGGGCTAATAATAGTTGGGATATAAGAAAATGTCCACATCCTTCTGCCATAGAATTAAGTAAGAATCCTGCTT
TAAGGAATCGTTGGGTTCGTTTTGAACGTGTTAAAAATCTGTGGTTAAGAACAGAATTGAAATATTTTTATTTTTACCAT
TTAAACAATGGAATATGGAATGCAAAAACTGTCTGGATTAGAAAAGGAACAGTAATTAATAAAATGTTAGATTTCTTAGA
TTTAAAGTATCCTAGCATTACTTCAATTACTGAAGTTCCTATTGAAAAAGCAATGACGGAGTATAGAACTTATTTGACAA
AACGGGGTGTTAGAATTACCACTACTAATTATAAGATTACTGCTAATCAAGAAAAAACACCTGTAAAAGCTAATTCCTAC
TATGTTACTAATCTAAAACAATTTATGGAGTTTTATGAGAACTTTTATTTTGATGGAGAGGAGTGGGATAAAGACGTTTG
GGATAGACGTAACTTACCTTTGCCAGATGATAAGGTTAACCCAACACAATATGAATATACAATTAACTTTAAAGGGTTTC
GGAATACATATTTTAAACAGCTTGTAAAAAGATATTGTAAGTTGAGATTGAACGTGGATAGCTTTTCCTATGTAAGTGAT
ATTGCCCAAAGACTTAAAGAGTTCTTTAATTTTCTGGACATGAAATTTAAACAAGTTCAGAGAGTACACCAATTAACGAG
AGTGGAAATTGAAGCATATTTAAGTGAACTAAACATGATGGGAATAAAACCTAGTACAATAACTGGGAGGATCTCTATAT
TGGAAGGACTATTTAGTACCCTTCTTAGGCTAGAATGGGATGATGTTCCTTCCAAAATATTAATTTATTCTGAGGACTAT
CCGAAAATACCAAGAGCAAAACCACGCTTTATAGACGAATTCGTCCTAGAGCAATTGAACAGTCATCTTGATAAATTACC
CGAATATATAGCTACGATGACTATGATTGTTCAAGAATGTGGAATGAGGATAAGTGAATTGTGCACCTTGAAAAAAGGCT
GTCTATTAGAGGACAAAGATGGAGATTTCTTTTAAAGTATTATCAATGGAAAATGAAAAAGGAGCATATAGTTCCAATAT
CTAAAGAGGTAGCTTTACTTATTAAAGTTCGGGAAGATAAAGTTTCAGAGGAATTTCCAGATAGTGAATACCTCTTTCCA
AGAAAAGATGGATCGCCATTAAAACAAGAAACATTTAGAGGTGAGTTAAATAAATTAGCTTATGAGCAAAATATAGTGGA
TAAATCAGGTGAGATTTATAGATTCCATGCCCATGCCTTTCGCCATACAGTAGGAACAAGAATGATTAACAACGGGATGC
CCCAGCATATTGTGCAGAAATTTTTGGGGCATGAAAGCCCAGAAATGACAAGCAGATACGCTCATATCTTTGATGAAACT
CTAAAAAATGAATTTACTAAATTTCAGGAAAAACTGGTTACCAATAATGGAGATGTGCTTGATCTAGATGAAGATAATGA
AGTCGATGATGTAGAGCTTCAATGGTTCAAGAAAAATATAAATGCACAAGTGCTTCCAAATGGTTATTGTAGATTGCCAG
TAGTAGCAGGTGGTTGTCCACATGCGAATGCATGCTTAGATTGCACTCACTTCTGTACCAGTAAGCAATTCTTACCACAG
CACGAAGAACAGTTAGAGCGTACAGAAGAGTTATTAGCCATAGCTAAGGATAAACGAATGGCAAAGACAAGTAGAGACTA
A

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB NP_373291.1 transposase B for Tn554 Not tested Type-II SCCmec DNA 0.0 99.9
tnpB BAA82202.1 transposaseB Not tested Type-II SCCmec DNA 0.0 99.9
tnpB NP_370579.1 transposase B Not tested Type-II SCCmec DNA 0.0 99.9
tnpB1 YP_039525.1 transposase B 1 Not tested Type-II SCCmec DNA 0.0 99.9
tnpB-3 YP_190049.1 transposase B Not tested Type-II SCCmec DNA 0.0 99.9
tnpB BAB47666.1 transposase B(Tn554) Not tested Type-III SCCmec DNA 0.0 99.9
tnpB BAC53828.1 transposase B(Tn554) Not tested SRImec-III and SCCmec-III region DNA 0.0 99.9
tnpB BAC57490.1 transposaseB Not tested Type-IIIinv SCCmec DNA 0.0 98.8
tnpB BAC57471.1 transposase B Not tested Type-IIIinv SCCmec DNA 0.0 98.4
unnamed BAB47606.1 transposase B of Transposon Tn554 Not tested Type-III SCCmec DNA 0.0 97.3