Gene Information

Name : hly (SABB_00339)
Accession : YP_008168568.1
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Virulence
Product : alpha-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1605759 - 1606727 bp
Length : 969 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGATGAAAATGAAAACACATATAGTCAGCTCAGTAACAACAACACTATTGCTAGGTTCCATATTAATGAATCCTGTCGC
TAATGCCGCAGATTCTGATATTAATATTAAAACCGGTACTACAGATATTGGAAGCAATACTACAGTAAAAACAGGTGATT
TAGTCACTTATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTATAGTTTTATCGATGATAAAAATCATAATAAAAAA
CTGCTAGTTATTAGAACGAAAGGTACCATTGCTGGTCAATATAGAGTTTATAGCGAAGAAGGTGCTAACAAAAGTGGTTT
AGCCTGGCCTTCAGCCTTTAAGGTACAGTTGCAACTACCTGATAATGAAGTAGCTCAAATATCTGATTACTATCCAAGAA
ATTCGATTGATACAAAAGAGTATATGAGTACTTTAACTTATGGATTCAACGGTAATGTTACTGGTGATGATACAGGAAAA
ATTGGCGGCCTTATTGGTGCAAATGTTTCGATTGGTCATACACTGAAATATGTTCAACCTGATTTCAAAACAATTTTAGA
GAGCCCAACTGATAAAAAAGTAGGCTGGAAAGTGATATTTAACAATATGGTGAATCAAAATTGGGGACCATATGATAGAG
ATTCTTGGAACCCGGTATATGGCAATCAACTTTTCATGAAAACTAGAAATGGCTCTATGAAAGCAGCAGATAACTTCCTT
GATCCTAACAAAGCAAGTTCTCTATTATCTTCAGGGTTTTCACCAGACTTCGCTACAGTTATTACTATGGATAGAAAAGC
ATCCAAACAACAAACAAATATAGATGTAATATACGAACGAGTTCGTGATGACTACCAATTGCACTGGACTTCAACAAATT
GGAAAGGTACCAATACTAAAGATAAATGGATAGATCGTTCTTCAGAAAGATATAAAATCGATTGGGAAAAAGAAGAAATG
ACAAATTAA

Protein sequence :
MMKMKTHIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKK
LLVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGK
IGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFL
DPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWIDRSSERYKIDWEKEEM
TN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 4e-144 99
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 3e-144 99
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 3e-144 99
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 1e-144 99
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 1e-144 99
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 4e-146 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hly YP_008168568.1 alpha-hemolysin VFG1293 Protein 2e-144 99