Gene Information

Name : pdhD (SABB_01060)
Accession : YP_008168169.1
Strain : Staphylococcus aureus Bmb9393
Genome accession: NC_021670
Putative virulence/resistance : Unknown
Product : Dihydrolipoyl dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1135075 - 1136481 bp
Length : 1407 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
ATGGTAGTTGGAGATTTCCCAATTGAAACAGATACTATAGTAATCGGAGCAGGTCCTGGTGGATACGTTGCAGCAATTCG
TGCAGCTCAATTAGGACAAAAAGTAACAATCGTTGAGAAAGGTAATCTTGGTGGTGTTTGCTTAAACGTAGGATGTATTC
CTTCAAAAGCATTACTACATGCTTCTCACCGTTTTGTTGAAGCACAACATTCTGAAAACTTAGGTGTTATTGCTGAAAGT
GTTTCTTTAAACTTCCAAAAAGTTCAAGAATTCAAATCATCAGTTGTTAATAAATTAACTGGTGGTGTTGAAGGCTTACT
TAAAGGTAACAAAGTTAACATCGTTAAAGGTGAAGCATATTTCGTAGATAACAATAGCTTACGTGTTATGGACGAAAAGA
GCGCACAAACATACAACTTTAAAAATGCAATCATTGCAACAGGTTCAAGACCAATTGAAATTCCTAATTTCAAATTCGGT
AAACGTGTTATCGACTCAACAGGTGCTTTAAACTTACAAGAAGTACCAGGTAAATTAGTTGTAGTTGGTGGAGGATACAT
TGGATCAGAATTAGGTACAGCATTTGCTAACTTTGGTTCAGAAGTAACCATCCTTGAAGGTGCTAAAGATATCTTAGGTG
GCTTCGAAAAACAAATGACACAACCTGTTAAAAAAGGTATGAAAGAAAAAGGTGTTGAAATCGTTACTGAAGCTATGGCT
AAATCAGCTGAAGAAACAGATAACGGAGTTAAAGTTACTTATGAAGCTAAAGGCGAAGAGAAAACAATCGAAGCTGATTA
TGTATTAGTAACTGTAGGTCGTCGTCCAAACACAGACGAATTAGGCCTAGAAGAATTAGGTGTTAAATTCGCTGACCGTG
GATTATTAGAAGTTGATAAACAAAGCCGTACGTCTATCAGCAATATCTATGCAATTGGTGATATCGTTCCAGGTTTACCA
CTTGCTCACAAAGCTAGCTATGAAGCTAAAGTTGCTGCTGAAGCAATTGATGGTCAAGCTGCTGAAGTTGATTACATTGG
TATGCCAGCAGTATGCTTTACTGAACCAGAATTAGCTACAGTTGGTTATTCAGAAGCGCAAGCTAAAGAAGAAGGTTTAG
CAATTAAAGCTTCTAAATTCCCATATGCAGCAAATGGTCGTGCATTATCATTAGATGATACTAACGGATTTGTTAAACTT
ATTACACTTAAAGAAGATGATACTTTAATCGGTGCTCAAGTAGTTGGTACTGGTGCATCAGATATTATCTCTGAATTAGG
TTTAGCAATTGAAGCTGGTATGAATGCTGAAGATATCGCATTAACAATCCATGCACATCCAACATTAGGTGAGATGACTA
TGGAAGCAGCAGAAAAAGCTATCGGATACCCAATCCATACAATGTAA

Protein sequence :
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQHSENLGVIAES
VSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFG
KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMA
KSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLP
LAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLDDTNGFVKL
ITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 6e-109 50