Gene Information

Name : join (PSYCG_00005)
Accession : YP_008167139.1
Strain :
Genome accession: NC_021668
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25748 - 335 bp
Length : 675 bp
Strand : +
Note : response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGCACGCATATTATTGATAGAAGACGACAGCACCATCGCTGATGGAATTGTCCTTGGCTTAAAAAGTCATGGCATGAT
GGTGGATTGGTTTGGTGATGCCAAGCAAGGTGAGATGGCGCTGCAAGATGGCATGTTTGATGCGGTACTGCTGGATTTGA
CCTTGCCAAAAGGTGATGGCATGACCGTCCTAAAAAACTGGCGGGAAAAACACATAGATACGCCAGTATTGATTATCACC
GCTCGCGATGCGATTGCCAATCGTGTGGCAGGACTCAATGCCGGCGCTGATGATTATTTGGTGAAGCCATTTGCATTAGA
TGAGGTGATTGCCCGTCTACAAGCATTGATGAGACGCAGCCAAGGTCGGTGTCAACCTGAAGTCCGTTATGGCGAAGTGG
CCTATCAGCCTCAGAATCAGCAAGTCTCTTATCAAGGCAAAATGGTAGAATTAACCATCAAAGAAGTGGCAATCTTAGAG
CAAATGCTGACCCACCCTAAGCAAATCCACAGCCGCGCAAGCTTAGAAGACAAGCTATATGGGTGGCAACAAGATATCGA
AAGCAATGCCATTGAAGTACACATTCATCATTTACGTAAAAAACTGGGCAATGATTTTATCTTGACCAAACGCGGTATTG
GCTACTATCTCAATCCAGTCCATAACCACCATTAA

Protein sequence :
MARILLIEDDSTIADGIVLGLKSHGMMVDWFGDAKQGEMALQDGMFDAVLLDLTLPKGDGMTVLKNWREKHIDTPVLIIT
ARDAIANRVAGLNAGADDYLVKPFALDEVIARLQALMRRSQGRCQPEVRYGEVAYQPQNQQVSYQGKMVELTIKEVAILE
QMLTHPKQIHSRASLEDKLYGWQQDIESNAIEVHIHHLRKKLGNDFILTKRGIGYYLNPVHNHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
join YP_008167139.1 transcriptional regulator BAC0487 Protein 7e-37 44