Gene Information

Name : A606_02090 (A606_02090)
Accession : YP_008164933.1
Strain : Corynebacterium terpenotabidum Y-11
Genome accession: NC_021663
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 497920 - 500538 bp
Length : 2619 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGTTCGAGAGGTTCACTGACCGGGCGCGGCGCGTCGTCGTGTTGGCGCAGGAGGAAGCCCGCGCGCTCAACCACAACTA
CATCGGTACTGAGCACATCCTGCTCGGCCTGATCCATGAGGGCGAAGGTGTGGCAGCCAAGGCCCTGGAGTCGATGGGGA
TTTCCCTCGAGGCCGTCCGCACCGAGGTCGAGGACATCATCGGCACCGGAGGTCACCCGCCGAGCGGCTACATCCCCTTC
ACCCCGCGCGCCAAGAAGGTGCTGGAACTCGCCCTGCGCGAAGCCCTGCAGCTCGGCCACAAGTACATCGGCACCGAGCA
CATCCTCCTCGGCCTCATCCGTGAGGGTGAGGGTGTGGCCGCCCAGGTACTGGTCAAGCTGGGCGCCGACCTGTCGCGGG
TCCGTCAGCAGGTCATCCAGCTGCTGTCCGGCTACGAGGGCGGGGAGCCCGAGAGCGAGCAGGCCTCCGATGAGCCGGCC
GGTGCCGGCGTGGGCGGCAATGACAGCGCCCCGTCCGCCCCGTCCGGTAAGCCGGGTCAGAAGTCGAATTCCCTGGTCCT
CGACCAGTTCGGCCGCAACCTGACCCAGGCGGCCAAGGACGGCAAGCTGGATCCGGTGGTCGGTCGCGGCAAGGAGATCG
AGCGCATCATGCAGGTGCTCTCGCGGCGTACCAAGAACAACCCGGTGCTCATCGGAGAGCCCGGCGTCGGTAAGACGGCC
GTGGTTGAGGGTCTCGCCCTCGACATCGTCAATGGCAAGGTGCCGGAGACGCTGAAGGACAAGCAGCTCTACTCCCTCGA
CCTGGGTTCCCTGGTCGCCGGTTCCCGCTACCGCGGTGATTTCGAGGAGCGCCTGAAGAAGGTGCTCAAGGAGATCAACC
AGCGCGGCGACATCATTCTGTTCATCGATGAGATCCACACCCTCGTCGGTGCCGGTGCCGCCGAAGGTGCGATCGACGCG
GCCAGCATCCTCAAGCCGAAGTTGGCCCGTGGTGAACTGCAGACCATCGGCGCCACCACCCTCGACGAGTACCGGAAGCA
CATCGAGAAGGACGCCGCTCTGGAGCGTCGTTTCCAGCCCGTGCAGGTGCCGGAGCCGAGTGTCGAGATGACCGTGGAGA
TCCTCAAGGGTCTGCGCGACCGTTACGAGGCACACCACCGGGTGTCCATCACCGACGGCGCACTGGCCGCGGCTGCCCGG
CTGTCCGACCGGTACATCAACGACCGGTTCCTGCCGGACAAGGCCGTCGACCTCATCGACGAGGCTGGCGCCCGCATGCG
CATCAAGCGGATGACCGCGCCGAAGGCGGTCCAGGATGTCGACGACCGGATCGCCGAGGTCCGCCGGGCCAAGGAAGCCG
CGATCGACGACCAGGACTTCGAGAAGGCCGCGTCCCTGCGCGACGACGAGCGCAAGCTCACCGACGAGCGTGCCGAGAAG
GAGAAGCAGTGGCGTGCCGGTGAACTCGACGATGTCGCCGAGATCGGCGAGCAAGAGATCGCTGAGGTGCTCGGTTCCTG
GACCGGCATCCCGGTCGTCCAGCTCACCGAGGAAGAGACCACCCGTCTGCTCCACATGGAGGATGAGCTGCACAGGCGGA
TCATCGGCCAGGAGGACGCCGTCAAGGCGGTTTCCCGGGCGATCCGTCGTACCCGTGCCGGCCTGAAGGACCCGAAGCGT
CCCTCCGGCTCCTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAGGCGCTCGCCGAGTTCCTCTT
CGGTGATGAGGATTCGCTGATCTCCATCGACATGGGCGAGTTCCACGACAAGTTCACCGCGTCCCGCCTGTTCGGTGCTC
CCCCCGGATACGTCGGCTACGACGAGGGTGGTCAGCTCACCGAGAAGGTGCGTCGCAAGCCGTTCTCCGTGGTCCTCTTC
GACGAGATCGAGAAGGCCCACTCCGAGATCTACAACACTCTGCTGCAGGTGCTCGAGGAAGGCCGTCTCACCGACGGCCA
GGGTCGCGTCGTGGACTTCAAGAACACGGTGCTGATCTTCACCTCGAACCTCGGCACCAGGGACATCTCCAAGGCTGTGG
GCATGGGCTTCTCGTCCACCGGTGAGACCGACGAGGCCGGTCAGTACGCCCGGATGAAGTCGAAGGTCAACGAGGAGCTG
AAGAAGCACTTCCGCCCCGAGTTCCTCAACCGTATCGATGACATCGTGGTCTTCCACCAGCTCACTCAGGCACAGATCGT
CGAGATGGTCGACCTGCTGCTCGGGCGGCTGCGTAAGGCTCTGGCCGACAAGGACATGGAGCTGGAGGTGTCCGAGCAGG
CGAAGGATCTGCTGGCCAAGCGAGGCTTCGACCCGGTGCTCGGTGCCCGGCCGCTGCGCCGGACCATCCAGCGCGAGATC
GAGGACCACCTGTCCGAGGAGATCCTGTTCGGCAACGTCCGTGATGGAGAGATCGTCACCGTCGACGTGGACAACTGGGA
CGGCGGCCAGCGGACCGAAGGTGCGACCTTCGTCTTCGGGTCGAAGCCGAAGCCGGTGCCGGTCGTCGTCCCGGAGACCA
CCCCGGAGACTCCGGAGACGGCGGAGACGGTGGACGCCTCCGACGCGTCCCAGAGCTGA

Protein sequence :
MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRTEVEDIIGTGGHPPSGYIPF
TPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLLSGYEGGEPESEQASDEPA
GAGVGGNDSAPSAPSGKPGQKSNSLVLDQFGRNLTQAAKDGKLDPVVGRGKEIERIMQVLSRRTKNNPVLIGEPGVGKTA
VVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA
ASILKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVEMTVEILKGLRDRYEAHHRVSITDGALAAAAR
LSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPKAVQDVDDRIAEVRRAKEAAIDDQDFEKAASLRDDERKLTDERAEK
EKQWRAGELDDVAEIGEQEIAEVLGSWTGIPVVQLTEEETTRLLHMEDELHRRIIGQEDAVKAVSRAIRRTRAGLKDPKR
PSGSFIFAGPSGVGKTELSKALAEFLFGDEDSLISIDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLF
DEIEKAHSEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTRDISKAVGMGFSSTGETDEAGQYARMKSKVNEEL
KKHFRPEFLNRIDDIVVFHQLTQAQIVEMVDLLLGRLRKALADKDMELEVSEQAKDLLAKRGFDPVLGARPLRRTIQREI
EDHLSEEILFGNVRDGEIVTVDVDNWDGGQRTEGATFVFGSKPKPVPVVVPETTPETPETAETVDASDASQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A606_02090 YP_008164933.1 ATP-dependent Clp protease ATP-binding subunit VFG0079 Protein 0.0 59
A606_02090 YP_008164933.1 ATP-dependent Clp protease ATP-binding subunit VFG0080 Protein 5e-152 51