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Name : gabD (PSYCG_04575) Accession : YP_008162788.1 Strain : Psychrobacter sp. G Genome accession: NC_021661 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 998639 - 1000105 bp Length : 1467 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCTAAAGACGACCCTAAATCTCTCAAACCCAGATTTGATCAAACAGCAGTGTCTTATCAAAGACGGATGGCACGCTGC CAATGATGATGCCACTATTGAAGTGAGCAATCCATTCAACGGCGATATTATCGGTACGGTGCCAAGCTTGACGACCGCTG ATGTCAATGATGCTGTTACTTACTCTCACGAAGCTCAAATCACTTGGGCCGCCAAAACCCCACAAGAACGCGCGCAGCTG CTGCAAAAATGGGCAGATCTTATCGATGCCAACAAAGAAGATTTGGCCATTATCATGACCGCCGAGCAGGGCAAGCCTTT GGCTGAATCACGCGGTGAGATTGGTTATGCCAATAGCTTTATCCGCTGGTTTGCAGAAGAAGGCAAACGTGTTTATGGTG ATGTCATTCCTGCAACCAACTCGCAATTACGCTATGTGGTATTAAAACAGCCGGTTGGCGTTTGTGCTGCCATCACGCCT TGGAACTTTCCAGCGGCGATGATCACGCGTAAAGCAGCTCCTGCACTGGCAGCAGGCTGTACTATCATTATCAAACCTGC GACTGAAACGCCATTTTCTGCCTTAGCACTCGGTGCATTGGCTGAGCAAGCAGGTATTCCTGCCGGCGTTATCCAAGTTG TGACCGGTAAATCATCTGTTATCGGCGATATTCTTACCGGCGATGCTCGCATTCACAAGCTATCATTCACAGGCTCTACC GAAGTCGGTCGCACCTTAATGGCGCAGTGTGCTCCAACGATTAAAAAGCTGTCATTAGAGCTTGGCGGCAATGCACCGTT TATCGTTTTTGATGATGCCGATCTTGAAAAAGCTGCTGAAGGTCTAATCGCCTCTAAATACCGTAACGCTGGTCAAACCT GTGTGTGTGCCAACCGCGTTTATGTTCAAGACAGCATTAAAGATGAATTCTTAGATATCTTTATCAAGAAAGTCGCTGAG CTAAAAGTCGGTAATGGCATGGAAGAAGGGGTCAACGTTGGTCCTTTGATTAATGAAAAAGCCTTACAAAAAGTACAAGC GCTACTAAAAGATGCGCTAGACAAAGGCGCAACCCTGATTGCTGGTGGCAGTACGAATAATGCGTCAGCCCTTGCTTACA ACCCAACGGTTATCACCGATATCAGCGCTGGTATGGATATTGCCAGCGAAGAGATATTTGGTCCTATCGCGCCAGTCTTT ACTTTTTCATCTGAAGAAGAAGTTATTCGCGCAGCCAACGACACTATCTACGGTCTAGCAGCTTATTTTTATAGCAGCGA CTATGCGCGTGCTTGGCGCGTGACCGAAGGTCTTGAATATGGCATGGTTGGACATAATACGGGCATGCTCTCAACAGAAG TAGCACCATTTGGCGGTGTCAAACAATCTGGTTTTGGTCGTGAAGGTTCAAAATACGGCATCGAAGAATATGTTGTGACC AAATACTGGTGTTCTGACGTCAGCTAA Protein sequence : MLKTTLNLSNPDLIKQQCLIKDGWHAANDDATIEVSNPFNGDIIGTVPSLTTADVNDAVTYSHEAQITWAAKTPQERAQL LQKWADLIDANKEDLAIIMTAEQGKPLAESRGEIGYANSFIRWFAEEGKRVYGDVIPATNSQLRYVVLKQPVGVCAAITP WNFPAAMITRKAAPALAAGCTIIIKPATETPFSALALGALAEQAGIPAGVIQVVTGKSSVIGDILTGDARIHKLSFTGST EVGRTLMAQCAPTIKKLSLELGGNAPFIVFDDADLEKAAEGLIASKYRNAGQTCVCANRVYVQDSIKDEFLDIFIKKVAE LKVGNGMEEGVNVGPLINEKALQKVQALLKDALDKGATLIAGGSTNNASALAYNPTVITDISAGMDIASEEIFGPIAPVF TFSSEEEVIRAANDTIYGLAAYFYSSDYARAWRVTEGLEYGMVGHNTGMLSTEVAPFGGVKQSGFGREGSKYGIEEYVVT KYWCSDVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-126 | 55 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-81 | 41 |
