Gene Information

Name : gabD (PSYCG_04575)
Accession : YP_008162788.1
Strain : Psychrobacter sp. G
Genome accession: NC_021661
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehdyrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.16
Position : 998639 - 1000105 bp
Length : 1467 bp
Strand : +
Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCTAAAGACGACCCTAAATCTCTCAAACCCAGATTTGATCAAACAGCAGTGTCTTATCAAAGACGGATGGCACGCTGC
CAATGATGATGCCACTATTGAAGTGAGCAATCCATTCAACGGCGATATTATCGGTACGGTGCCAAGCTTGACGACCGCTG
ATGTCAATGATGCTGTTACTTACTCTCACGAAGCTCAAATCACTTGGGCCGCCAAAACCCCACAAGAACGCGCGCAGCTG
CTGCAAAAATGGGCAGATCTTATCGATGCCAACAAAGAAGATTTGGCCATTATCATGACCGCCGAGCAGGGCAAGCCTTT
GGCTGAATCACGCGGTGAGATTGGTTATGCCAATAGCTTTATCCGCTGGTTTGCAGAAGAAGGCAAACGTGTTTATGGTG
ATGTCATTCCTGCAACCAACTCGCAATTACGCTATGTGGTATTAAAACAGCCGGTTGGCGTTTGTGCTGCCATCACGCCT
TGGAACTTTCCAGCGGCGATGATCACGCGTAAAGCAGCTCCTGCACTGGCAGCAGGCTGTACTATCATTATCAAACCTGC
GACTGAAACGCCATTTTCTGCCTTAGCACTCGGTGCATTGGCTGAGCAAGCAGGTATTCCTGCCGGCGTTATCCAAGTTG
TGACCGGTAAATCATCTGTTATCGGCGATATTCTTACCGGCGATGCTCGCATTCACAAGCTATCATTCACAGGCTCTACC
GAAGTCGGTCGCACCTTAATGGCGCAGTGTGCTCCAACGATTAAAAAGCTGTCATTAGAGCTTGGCGGCAATGCACCGTT
TATCGTTTTTGATGATGCCGATCTTGAAAAAGCTGCTGAAGGTCTAATCGCCTCTAAATACCGTAACGCTGGTCAAACCT
GTGTGTGTGCCAACCGCGTTTATGTTCAAGACAGCATTAAAGATGAATTCTTAGATATCTTTATCAAGAAAGTCGCTGAG
CTAAAAGTCGGTAATGGCATGGAAGAAGGGGTCAACGTTGGTCCTTTGATTAATGAAAAAGCCTTACAAAAAGTACAAGC
GCTACTAAAAGATGCGCTAGACAAAGGCGCAACCCTGATTGCTGGTGGCAGTACGAATAATGCGTCAGCCCTTGCTTACA
ACCCAACGGTTATCACCGATATCAGCGCTGGTATGGATATTGCCAGCGAAGAGATATTTGGTCCTATCGCGCCAGTCTTT
ACTTTTTCATCTGAAGAAGAAGTTATTCGCGCAGCCAACGACACTATCTACGGTCTAGCAGCTTATTTTTATAGCAGCGA
CTATGCGCGTGCTTGGCGCGTGACCGAAGGTCTTGAATATGGCATGGTTGGACATAATACGGGCATGCTCTCAACAGAAG
TAGCACCATTTGGCGGTGTCAAACAATCTGGTTTTGGTCGTGAAGGTTCAAAATACGGCATCGAAGAATATGTTGTGACC
AAATACTGGTGTTCTGACGTCAGCTAA

Protein sequence :
MLKTTLNLSNPDLIKQQCLIKDGWHAANDDATIEVSNPFNGDIIGTVPSLTTADVNDAVTYSHEAQITWAAKTPQERAQL
LQKWADLIDANKEDLAIIMTAEQGKPLAESRGEIGYANSFIRWFAEEGKRVYGDVIPATNSQLRYVVLKQPVGVCAAITP
WNFPAAMITRKAAPALAAGCTIIIKPATETPFSALALGALAEQAGIPAGVIQVVTGKSSVIGDILTGDARIHKLSFTGST
EVGRTLMAQCAPTIKKLSLELGGNAPFIVFDDADLEKAAEGLIASKYRNAGQTCVCANRVYVQDSIKDEFLDIFIKKVAE
LKVGNGMEEGVNVGPLINEKALQKVQALLKDALDKGATLIAGGSTNNASALAYNPTVITDISAGMDIASEEIFGPIAPVF
TFSSEEEVIRAANDTIYGLAAYFYSSDYARAWRVTEGLEYGMVGHNTGMLSTEVAPFGGVKQSGFGREGSKYGIEEYVVT
KYWCSDVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 3e-126 55
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 2e-81 41