Gene Information

Name : PSYCG_04030 (PSYCG_04030)
Accession : YP_008162680.1
Strain : Psychrobacter sp. G
Genome accession: NC_021661
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 873412 - 874128 bp
Length : 717 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAAGTACTGTTAGTAGAAGATGAGCAAAAACTTGGAGAATATATTAAGAAAGGCTTAACTGAGGCCGGCTTCATCGT
GGATCATTATATGACTGGTCTAGATGGCTATCATGCGCTAATGACTGAAGAATTTAGTGTGGTGCTGATGGATGTGATGT
TACCTGACGTCAGTGGCTTTGAGCTGATACAGCGCTACCGTGCCGCTGGAAAGCATACGCCTGTTTTATTTTTAACCGCT
AAAGATGATTTAAGTGATCGAATCAAAGGTATTGAAATTGGTGGCGATGATTATCTGACCAAGCCTTTTGCTTTTGCTGA
GCTGATTGTTAGAATAAAAAGTTTGCTGCGACGTGCCAACCAATCGGACTATAAAAGCACAGTCATCCATACCGCTGATC
TGAAAATGGATATTGCCAAACGCACTGTATATAGAGGCGATGCCCTTATCAAACTGACTGCCAAAGAGTTTGCTCTATTA
CAGTTTTTTCTAGAACGTCAAGGTGAAGTACTGCCACGTACTGTGATTGCCTCGCAAGTGTGGGATATAAATTTTGACAG
CGATACCAATGTCATTGACGTAGCTATCAGACGTCTACGAATCAAAATCGACGATGGTTTTGACACCAAGCTGATTCACA
CAGTACGCGGTATGGGCTACAGGTTAGAGCCGCTGGCTGTAGGCGTGGGTGACGATGACAAAGATGATCCAAAATAA

Protein sequence : 
MKVLLVEDEQKLGEYIKKGLTEAGFIVDHYMTGLDGYHALMTEEFSVVLMDVMLPDVSGFELIQRYRAAGKHTPVLFLTA
KDDLSDRIKGIEIGGDDYLTKPFAFAELIVRIKSLLRRANQSDYKSTVIHTADLKMDIAKRTVYRGDALIKLTAKEFALL
QFFLERQGEVLPRTVIASQVWDINFDSDTNVIDVAIRRLRIKIDDGFDTKLIHTVRGMGYRLEPLAVGVGDDDKDDPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-53 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-52 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSYCG_04030 YP_008162680.1 transcriptional regulator BAC0111 Protein 3e-63 57
PSYCG_04030 YP_008162680.1 transcriptional regulator BAC0197 Protein 3e-61 57
PSYCG_04030 YP_008162680.1 transcriptional regulator BAC0347 Protein 1e-57 56
PSYCG_04030 YP_008162680.1 transcriptional regulator BAC0638 Protein 6e-56 55
PSYCG_04030 YP_008162680.1 transcriptional regulator BAC0125 Protein 2e-58 55
PSYCG_04030 YP_008162680.1 transcriptional regulator BAC0083 Protein 5e-61 55
PSYCG_04030 YP_008162680.1 transcriptional regulator BAC0308 Protein 9e-58 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSYCG_04030 YP_008162680.1 transcriptional regulator VFG0596 Protein 5e-54 50