Gene Information

Name : PSYCG_03960 (PSYCG_03960)
Accession : YP_008162667.1
Strain : Psychrobacter sp. G
Genome accession: NC_021661
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 858182 - 858868 bp
Length : 687 bp
Strand : -
Note : response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAGACCATACTAATTATCGAAGATGAAGCCCATATTGCGCGATTTATTAAAACAGCGATGGAGCAAGAAGGCTATCA
AGTTTATATCGCTGATAGCTCGCACAGGGGCTTAATAGAAGCTGCAACGCGCCGTCCTGATTTACTTATATTAGATCTTG
GCTTACCTGACGGTGATGGCTGTGACGTCATTGCAGATATTAGGACGTGGTCCTCATTACCTATTTTAGTATTATCAGCT
CGCAGTGATGAACAGGATAAAATAAAAGCGCTCAATTTAGGTGCAGATGATTATTTAGTGAAACCTTTTAGTATGGGCGA
ATTGGTTGCGCGTGTTAATGCACATATGCGCCGCTGGCAGGTTGGCTACGAAGCACCTAGTCAGATAGAGCTTGGCAATG
TCAGCATCGATCTGACGCAGAGACAAGTCAAGAAAAATGGTAAAGACGTCCATTTAACACCTATTGAGTATCGCTTGCTG
ACTGTCCTGATCCGTTATGCGGAAAAAGTACTGACCCATAAACAACTGCTTAATGAAGTTTGGGGTAAAGGTCATAATCA
TCAAGAACATTATGTTCGCATATTTATGTCAAATTTACGCCAGAAACTAGAAGATAATCCTTCTCGACCAAATTTCTTCT
TAACCGAAATCGGTGTCGGCTACAAGCTACATATCCCTAAAGACTGA

Protein sequence :
MKTILIIEDEAHIARFIKTAMEQEGYQVYIADSSHRGLIEAATRRPDLLILDLGLPDGDGCDVIADIRTWSSLPILVLSA
RSDEQDKIKALNLGADDYLVKPFSMGELVARVNAHMRRWQVGYEAPSQIELGNVSIDLTQRQVKKNGKDVHLTPIEYRLL
TVLIRYAEKVLTHKQLLNEVWGKGHNHQEHYVRIFMSNLRQKLEDNPSRPNFFLTEIGVGYKLHIPKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-34 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_012469.1.7685629. Protein 1e-28 44
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_002952.2859905.p0 Protein 2e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_003923.1003749.p0 Protein 1e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_007622.3794472.p0 Protein 2e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-26 41
PSYCG_03960 YP_008162667.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-26 41