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Name : PSYCG_01470 (PSYCG_01470) Accession : YP_008162189.1 Strain : Psychrobacter sp. G Genome accession: NC_021661 Putative virulence/resistance : Virulence Product : secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 294111 - 295679 bp Length : 1569 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGATGCAACTGCCGTACAGTTTTGCAAAACGCCATCAGATTTTGGTTATTCTAGCCATTGATCCTGAGCTGCCACCGAC ATTGCTATTGACCAAGGTGACGCCGCTTTCAGCAATCAATGAAGCGGTGCGATTTTTACAGCAGCAAGGCATACGCGGTG TGCCAATATATGAAAGTGTCAGCTCGGACGATTTTGAGAAACGCATGAATGCCGCTTATGCAGGTAACACTGGCGAGTCA CAGCATATCGCAGCTGGTCTTGAAGACCATCCTGATCTTGATAGCTTGGCAGATAGCGTGCCTGAAACTGAAGACTTAAT GGACCAACAAGACGATGCACCTATTATCCGTCTGATTAATGCATTATTGTCCGAGGCGATACGTCTAAACGCCTCAGATA TCCATATTGAAACCTTTGAAAAACGCTTGGTCGTTCGCTTCCGCGTCGATGGTGAGCTTAAAGAAATCATCACACCAAAA CGTCAATTAGCGCCGTTATTAGTATCGCGCATTAAAGTGATGGCAAAACTGGATATCGCCGAAAAGCGCGTGCCGCAAGA TGGGCGTATTAGCTTGCGCTTAGCGGGGCGCGAGGTTGATGTGCGGGTATCGACATTGCCGTCAAGTTTTGGTGAGCGTG TGGTCATGCGCTTACTAGATAAGCAAGCAGGTCGCTTGACTATGACTTATTTGGGGCTATCTGATAATGATTATAGTGAG CTTAAGCGCTTAATCCATCGCCCGCATGGCATTATATTAGTGACAGGACCGACAGGCTCGGGTAAAACCACCACGCTATA TTCTGCACTAACTGATTTGAACGACCAAACCCGTAATATCTTGACCGCTGAAGATCCAATTGAATTTCAGCTTGATGGTA TTGGGCAAACGCAGGTCAATAACAAAGTCGATATGACCTTTGCTAAGAGCTTGCGTGCAATGTTGCGTCAAGACCCAGAC GTGGTCATGGTGGGTGAAATTCGCGATTTAGAGACAGCAGAAATCGCTGTACAAGCGTCTTTAACAGGGCATTTGGTCTT ATCAACCCTACATACCAACACCGCTATTGGAGCGGTTACGCGCTTGCAAGATATGGGCGTTGAGCCGTTTTTATTATCAT CATCATTGATAGGCGTGGTCGCCCAGCGTTTGGTACGTACGTTATGTACACATTGTCATGATTGGCAGATGGCTGACCAT GAACAAGCCAAATTGTTTACTGAGATTGGTATTCAATCAATGTCTGACAATATTGTAGCTAACAATGCTGCTGATAATCT GACAGATAAAGCTATCAAGCTACCTAGAGCAGTCGGCTGCGATAAGTGTAACCAATCAGGCTTTAAAGGGCGAACAGCGA TATATGAAGTGGTGCCCGTTGATGATGCGCTGCGACGCATGATTCATAGCAATACCGCTGAGTACGAGCTAGAAGAGTAC GCCCGCCAAAAGACACCATCGATTCGTGCTGATGGTTTGCGTAAGGTAATCGCGGGACGTACGACATTAGAAGAAGTGCT ACGCGTGACCAAAGAAAGCGCCCTACTAGAGGACGCTTTGATTGTTTAG Protein sequence : MMQLPYSFAKRHQILVILAIDPELPPTLLLTKVTPLSAINEAVRFLQQQGIRGVPIYESVSSDDFEKRMNAAYAGNTGES QHIAAGLEDHPDLDSLADSVPETEDLMDQQDDAPIIRLINALLSEAIRLNASDIHIETFEKRLVVRFRVDGELKEIITPK RQLAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSFGERVVMRLLDKQAGRLTMTYLGLSDNDYSE LKRLIHRPHGIILVTGPTGSGKTTTLYSALTDLNDQTRNILTAEDPIEFQLDGIGQTQVNNKVDMTFAKSLRAMLRQDPD VVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLQDMGVEPFLLSSSLIGVVAQRLVRTLCTHCHDWQMADH EQAKLFTEIGIQSMSDNIVANNAADNLTDKAIKLPRAVGCDKCNQSGFKGRTAIYEVVPVDDALRRMIHSNTAEYELEEY ARQKTPSIRADGLRKVIAGRTTLEEVLRVTKESALLEDALIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-134 | 62 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-134 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSYCG_01470 | YP_008162189.1 | secretion system protein E | VFG0182 | Protein | 9e-138 | 61 |
| PSYCG_01470 | YP_008162189.1 | secretion system protein E | VFG2048 | Protein | 1e-133 | 60 |
| PSYCG_01470 | YP_008162189.1 | secretion system protein E | VFG1876 | Protein | 4e-128 | 54 |
| PSYCG_01470 | YP_008162189.1 | secretion system protein E | VFG0233 | Protein | 6e-87 | 48 |
| PSYCG_01470 | YP_008162189.1 | secretion system protein E | VFG0112 | Protein | 3e-85 | 46 |
| PSYCG_01470 | YP_008162189.1 | secretion system protein E | VFG2426 | Protein | 7e-72 | 45 |
| PSYCG_01470 | YP_008162189.1 | secretion system protein E | VFG1880 | Protein | 3e-81 | 45 |
