Gene Information

Name : glnA (PSYCG_07545)
Accession : YP_008163379.1
Strain : Psychrobacter sp. G
Genome accession: NC_021661
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 1752257 - 1753666 bp
Length : 1410 bp
Strand : -
Note : forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltra

DNA sequence :
ATGTCAAATAAACTACTTGATCTGATCAAATCATCCAACGCTAAATGGGTTGATTTCCGCTTCACTGATACCCGCGGTAA
AGAGCATCATATGAGCTTTCCAGCTCATAGCGTTGATGAAGAATCGATGGAAGATGGCAAAATGTTTGATGGCTCATCGA
TTGCTGGTTGGAAAGGGATTGAAGCATCAGACATGATATTGCGTCCTGATCCTGATACGGCGTTTATTGACCCATTCTTT
GATGCGGTTACGGTTGTTGTGACTTGTGACATCATTGAGCCATCAACCCTACAAGGTTATGACCGTGATCCACGTTCTAT
TGCACGCCGTGCTGAAGAGTATTTAAAATCTACCGGTATTGGTGACACTGCCTATTTTGGTCCTGAGCCTGAATTCTTTG
TGTTTGATGAAGTAAAATGGTCTGTGGGCATGTCTGGTGTCAGTCATGAAATCGTCGCTGAAGAAGCCGCTTGGTCAACT
AACAAAGACTACGAGTGGGGCAACATGGGTCATCGCCCACGTGTCAAAGGCGGTTATGTACCAGTGCCACCGGTTGATAG
CGCACAAGATATGCGTACCGTCATGTGCGATCGTATTGAAGATATGATTGGTGAAGGTTGTATCGAAGTCCATCACCATG
AAGTTGCGCCTTGTCAGTTAGAGATTGGCGTTGCTTTTAACACCCTAGTACGCAAAGCAGATGAAGTGCAAAAACTCAAA
TATGCCGTACATAATGTTGCTCATCAGTTTGGAAAAACCGCAACCTTTATGCCAAAGCCTATCGTTGGTGACAATGGCTC
TGGTATGCACGTCCATATCTCAATCTCAAAAGATGGTGTCAATACTTTCTCTGGTGATGAATATGCGGGCTTGTCTGAAA
CGGCATTGTATTTTGTCGGTGGTATCATTAAACATGCTCGTGCACTTAATGCGATTACCAATCCATCGACCAACAGCTAT
AAGCGCCTTGTGCCACATTATGAAGCGCCTATCAAGCTTGCGTACTCAGCATCTAATCGTTCAGCGTCTATCCGTATTCC
GCACGTTAGTAGCCCAAAAGCAGTGCGTGTTGAAGCACGTTTCCCTGATCCAGCAGCCAACCCATACCTAGCGTTTGCGG
CGTTGTTGATGGCTGGTATTGACGGTATTCAAAACAAAATGCATCCAGGTGAAGCGGCTGATAAAAATTTATATGATTTG
CCACCAGAAGAAGAAGCATTGATTCCAACAGTCGCTGAAAACTTAGAAGTGGCGCTACAAGCACTAAAAGATGATCATGA
GTTCTTATTAAAAGGCGATGTATTCACTAAAGAGATGTTAGAGGCTTATATTGCTCTAAAGCAAGAAGAAGCACAGCGCG
TCAACATTACTGTTCATCCAGTTGAGTTTGACTTGTATTACAGCTGCTAA

Protein sequence :
MSNKLLDLIKSSNAKWVDFRFTDTRGKEHHMSFPAHSVDEESMEDGKMFDGSSIAGWKGIEASDMILRPDPDTAFIDPFF
DAVTVVVTCDIIEPSTLQGYDRDPRSIARRAEEYLKSTGIGDTAYFGPEPEFFVFDEVKWSVGMSGVSHEIVAEEAAWST
NKDYEWGNMGHRPRVKGGYVPVPPVDSAQDMRTVMCDRIEDMIGEGCIEVHHHEVAPCQLEIGVAFNTLVRKADEVQKLK
YAVHNVAHQFGKTATFMPKPIVGDNGSGMHVHISISKDGVNTFSGDEYAGLSETALYFVGGIIKHARALNAITNPSTNSY
KRLVPHYEAPIKLAYSASNRSASIRIPHVSSPKAVRVEARFPDPAANPYLAFAALLMAGIDGIQNKMHPGEAADKNLYDL
PPEEEALIPTVAENLEVALQALKDDHEFLLKGDVFTKEMLEAYIALKQEEAQRVNITVHPVEFDLYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-100 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_008163379.1 glutamine synthetase VFG1399 Protein 9e-94 50