Gene Information

Name : PSYCG_06770 (PSYCG_06770)
Accession : YP_008163225.1
Strain : Psychrobacter sp. G
Genome accession: NC_021661
Putative virulence/resistance : Virulence
Product : iron ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1545160 - 1545927 bp
Length : 768 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCTATCAGTGAATGAACTACAGCTTGGCTATCATGGCGGACAGACAGTTATCAAAAACTTGTCCCTTGAGTTGCCAGA
AAATAAAGTCATTGGACTCATTGGTCCAAATGGTTGCGGAAAATCTACGCTATTAAAAGGCTTGTGCCGGCTGATTCAAC
CTCAATCGGGCAGAATCTTACTTAGACAACAAGATATGGCGCAATTGAATAATCGGCAGATTGCTCGTCAGATATCGGTA
TTGCCACAAGTACAGACCAATCCTGAAGGCTTGACTGTCAGACAGTTGGTTGAGTATGGCAGAACGCCCTATGTCTCACA
TTGGGGTAAGTTGAGCGCGACAGACAACCAGATAGTAGATAGCGTTATAAATGAGATGTCTATTCAATCTCTAGCTGAGA
CATCACTTGAAGCCTTATCTGGCGGTCAACAGCAGCGCGCTTGGCTCGCGATGGTTTTAGCGCAGGATACGGATATTATC
ATGCTGGATGAACCAACTACCTATCTAGATATCTCTTACCAAATAGAGCTGATGCGACTCATACGAGAATTAAAAGACAA
CGGCAAAAGCATTATAGTTGTGCTCCATGACCTCAACCAAGCAGCGAGATATTGTGATTTATTGGTGGTGCTAAAGTCGG
GCGAACTGCAAATAATGGGCACCCCTTGTGAGGTGGTGACGGAGGGAATGCTTGCTGATATATTTGACGTGCAAGCCAAA
GTGATTACAGACCCTGTAGCAGGTTCACCCATGTGTGTGTATTTATAG

Protein sequence : 
MLSVNELQLGYHGGQTVIKNLSLELPENKVIGLIGPNGCGKSTLLKGLCRLIQPQSGRILLRQQDMAQLNNRQIARQISV
LPQVQTNPEGLTVRQLVEYGRTPYVSHWGKLSATDNQIVDSVINEMSIQSLAETSLEALSGGQQQRAWLAMVLAQDTDII
MLDEPTTYLDISYQIELMRLIRELKDNGKSIIVVLHDLNQAARYCDLLVVLKSGELQIMGTPCEVVTEGMLADIFDVQAK
VITDPVAGSPMCVYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-65 53
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-52 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-50 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-50 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-49 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-49 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-49 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-49 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSYCG_06770 YP_008163225.1 iron ABC transporter BAC0164 Protein 3e-65 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSYCG_06770 YP_008163225.1 iron ABC transporter VFG1042 Protein 2e-65 53
PSYCG_06770 YP_008163225.1 iron ABC transporter VFG0925 Protein 1e-50 44