Gene Information

Name : M621_04295 (M621_04295)
Accession : YP_008157693.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : MFS transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 924331 - 925554 bp
Length : 1224 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGTATTTCACCTTCCGCTAAATCTCTCGCACCTGGGAATACGTCTCCTTCAAACTGGCCGTTGGCGCTGTGCGCCGG
TCTGTTGGGCATCGGGCAAAACGGCCTGTTGGTGGCGTTACCGGTGTTGGTCAGTATGACCCACTTGTCACTTTCCGTCT
GGGCTGGATTATTGACGCTCGGCTCTATGCTGTTTCTGGCCGGTTCCCCCTGGTGGGGGCGACAGTCTGAAATTCGCGGC
TGCAAGTTTGTCGTGACGATGGCGCTTGCCGGTTATTTGTTCAGTTTTGCTTTACTGGCATTGGCCGTTTGGGGGCTGGC
GGCCGGCTGGCTTTCACCGATGGCAGGGTTGGGCGGCCTGATCGTGGCGCGCGTTATCTATGGGCTGACGGTGTCCGGCA
TGGTGCCCGCCAGCCAAACCTGGGCATTGCAGCGTGCCGGCTACGAACAGCGCATGTCGGCGCTGGCGACCATCAGCTCC
GGGCTAAGCTGCGGGCGGTTGCTGGGTCCGCTGTGCGCCGCGTTGGCGTTGTCCCTTCATCCGATGGCACCGCTGTGGCT
GATGGCCATTGCACCATTAATCGCCTTGCTGGTGGTGTGCCGCCAGCATAACGATCCGCCCTTGCCGCCGGTGGCGCAGC
AGCAAAATCGCCTGCGTCTCACCATGGCGCCTTATCTGCTTTGCGCGCTGTTGCTGGCGGCATCGGTCAGCCTGATGCAG
CTCGGCCTGGCGCCGCATCTGACCCGTTTGTTCAACCATTCTGCCACGACCGTCAGCCACCATGTTGCCGTGTTGCTCAG
CGTAGCGGCGGCCTGTACGCTGCTGGCGCAGTTCCTGGTGGTGCGTCCGCAGCGCTTTAGCGCGCCGCAATTGCTGTTGA
TTGCGGCGGTATTGATGGTGGCGGGATTAGGGTTGATGTGCGCCCAACCGCTGGCGCTGTTCTATCTCGGTTGCGCGCTG
GCTTCCTTCGGTGCGGCGATGGCGACGCCAGGCTATCAGTTGATGCTGAACGATAAATTATCCACCGGCAAAGGCGCCGG
GGCTATCGCTACCAGCCATACGCTGGGCTACGGTCTGAGCGCGTTGATGGTGCCGGTGGTGGCAAGATTTTATGGCGAGT
CACAGCTGATTGCAGCGGCTCTGATGATGGCCGTCCTGCTGGGCGGTATCAGCGGCTGGCTATGGTGCCGGCAGCGTATT
CAGCTACATTCTGCGGGAGAGTAA

Protein sequence :
MSISPSAKSLAPGNTSPSNWPLALCAGLLGIGQNGLLVALPVLVSMTHLSLSVWAGLLTLGSMLFLAGSPWWGRQSEIRG
CKFVVTMALAGYLFSFALLALAVWGLAAGWLSPMAGLGGLIVARVIYGLTVSGMVPASQTWALQRAGYEQRMSALATISS
GLSCGRLLGPLCAALALSLHPMAPLWLMAIAPLIALLVVCRQHNDPPLPPVAQQQNRLRLTMAPYLLCALLLAASVSLMQ
LGLAPHLTRLFNHSATTVSHHVAVLLSVAAACTLLAQFLVVRPQRFSAPQLLLIAAVLMVAGLGLMCAQPLALFYLGCAL
ASFGAAMATPGYQLMLNDKLSTGKGAGAIATSHTLGYGLSALMVPVVARFYGESQLIAAALMMAVLLGGISGWLWCRQRI
QLHSAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shiF YP_002414047.1 putative membrane transport protein, major facilitator superfamily Not tested Not named Protein 2e-62 61
imm NP_839224.1 membrane transport protein Not tested SHI-2 Protein 5e-63 61
imm NP_709453.1 membrane transport protein Not tested SHI-2 Protein 5e-63 61
unnamed AAD54670.1 unknown Not tested SHI-2 Protein 7e-63 61
shiF AAD44744.1 ShiF Virulence SHI-2 Protein 4e-63 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_04295 YP_008157693.1 MFS transporter VFG0614 Protein 2e-63 61