Gene Information

Name : M621_04290 (M621_04290)
Accession : YP_008157692.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : aerobactin synthase IucA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 922448 - 924217 bp
Length : 1770 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
TTGATTCTCAGCGAAAATCGGATCATGACTCTCCAGTTTGAAACCGCGGCGACCGACGTGGCTGCCCAATGTTTTCTCAA
CGCACTGATGCGTGAAACCCAGGACTGGCAAATCGTTCCAGCCGCCAGCCACCAACAGTATCCGCAGCTCAACATTCCGC
TTTCATCTACCCAAGCTATTCGCATTGCCTTACGCCATACCTCGCCCACACAACATCATCAGTATCTTTTCCCTGCCCAT
CTGCATCAGCAGGACGATGGTGCTGGCGTGGCGCTGAGCATGGAGCAACTGGTCACCCTGCTGCTGGAGAAACCGGCGAT
AAAAGGTGAGCTGCCCGATGAAGCGGTGGCGCGTTTCCGCCAGCGAGTGCTGGAAAGTCATGATAATACCCGCCAGGCCA
TTGATGTCCGGCTGGACTGGCCTTCACTGCGCGACAAGCCGCTGAACTTTGCCCAGGCGGAGCAGGGTCTGCTGGTCGGC
CACGCCTTCCACCCGGCGCCGAAATCCCATGAACCCTTCGATGAGCAGCAGGCGCGCCGCTACCTGCCGGACTTTGCCGC
CAGCTTCCCGCTGCGCTGGTTTGCCGTCGATAAGCGCTACCTGTGCGGGGACAGCCTGAACCTGACGCTGCAACAACGCC
TGCAACGTTTTGCCGCCGAAAGCGCGCCGCAGCTGTTGGCGCACTTTACCGATGACGTGTGGCTGCTGCCGATGCATCCG
TGGCAGGCCGACCATCTGCTGACGCAGACATGGTGCCAGGATCTCGCCGCGCAGGGATTGCTGAGCGATCTGGGCGAAGC
CGGCGAGCGCTGGCTGCCAACCAGCTCCTCACGCTCGCTGTACAGCGCGGGCAACCGCGACATGATCAAATTCTCCCTCA
GCGTGCGCCTGACCAACTCGGTGCGCACCCTGTCGGTTAAAGAAGTAAAACGCGGTATCCGCCTGGCCCGGCTGGCGCAA
ACGCCGCGCTGGCAAGAGCTGCAAGCGCGCTATCCGACCTTCCGCGTGATGCAGGAAGACGGCTGGGCCGGCCTGCGCTC
GGCGGACGGTACCGTCCAGGAAGAAAGCCTGATGGCGCTGCGCGATAACCTGCTGTTCGACCAGCCGCATAGCCAAACCA
ACGTGCTGGTAACGCTGACGCAGGCGGCGCCGGATGGCGGTGACAGCCTGCTGGCCGCCGCAGTGCGCCGTCTGGCCGCC
CGACTGAATCTGCCGCTGCAACAAGCCGCCCATGCCTGGCTGGACGCCTACTGCCAACAGGTGTTGTTGCCGCTGTTCAG
CACGGAAGCCGATTACGGGCTGGTGCTGCTGGCCCACCAGCAAAACATTCTGGTGGAGATGCAGCAGGATCTGCCGATCG
GCATGCTGTACCGCGACTGCCAGGGCAGCGGCTTTACCCGCGATGCCGCGCCGTGGCTGGAAGAGATTGGCGAAGCCGAT
GCGGAAAACCGCTTCAGCGAACAGCAATTGCTGCGCTACTTCCCTTACTACCTGCTGGTGAACTCCAGCCTGGCGGTGAC
CGCCGCGCTGGCTGCCGCCGGTTTCGACACGGAAGAAAGCCTGATGGCTCGGGTGCGCGACGCGCTGAGCGGCCTGCGCG
CCACGGCCAAAAACACACTGTGCCTGGACTACGTGCTCGACAGCAGCCACTGGAACTGCAAAGGCAACTTCTTCTGTTAC
CTGCACGACCACAACGAAAATACCATCGTCGATCCGGCGGTGATCTACTTTGATTTCGTCAATCCGCTGCGCCAGGGAGC
CGCCCAATGA

Protein sequence :
MILSENRIMTLQFETAATDVAAQCFLNALMRETQDWQIVPAASHQQYPQLNIPLSSTQAIRIALRHTSPTQHHQYLFPAH
LHQQDDGAGVALSMEQLVTLLLEKPAIKGELPDEAVARFRQRVLESHDNTRQAIDVRLDWPSLRDKPLNFAQAEQGLLVG
HAFHPAPKSHEPFDEQQARRYLPDFAASFPLRWFAVDKRYLCGDSLNLTLQQRLQRFAAESAPQLLAHFTDDVWLLPMHP
WQADHLLTQTWCQDLAAQGLLSDLGEAGERWLPTSSSRSLYSAGNRDMIKFSLSVRLTNSVRTLSVKEVKRGIRLARLAQ
TPRWQELQARYPTFRVMQEDGWAGLRSADGTVQEESLMALRDNLLFDQPHSQTNVLVTLTQAAPDGGDSLLAAAVRRLAA
RLNLPLQQAAHAWLDAYCQQVLLPLFSTEADYGLVLLAHQQNILVEMQQDLPIGMLYRDCQGSGFTRDAAPWLEEIGEAD
AENRFSEQQLLRYFPYYLLVNSSLAVTAALAAAGFDTEESLMARVRDALSGLRATAKNTLCLDYVLDSSHWNCKGNFFCY
LHDHNENTIVDPAVIYFDFVNPLRQGAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucA NP_839223.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-168 65
iucA NP_709454.2 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-168 65
iucA AAD44746.1 IucA Virulence SHI-2 Protein 4e-168 65
iucA YP_002414046.1 aerobactin siderophore biosynthesis protein Virulence Not named Protein 3e-168 65
iucA AAK71631.1 IucA Virulence SHI-3 Protein 5e-151 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_04290 YP_008157692.1 aerobactin synthase IucA VFG0615 Protein 2e-168 65
M621_04290 YP_008157692.1 aerobactin synthase IucA VFG0940 Protein 1e-168 65
M621_04290 YP_008157692.1 aerobactin synthase IucA VFG1081 Protein 3e-151 61