Gene Information

Name : M621_03720 (M621_03720)
Accession : YP_008157589.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : DNA repair protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 813727 - 814062 bp
Length : 336 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGTTGAGCTGGCACCGCTTGAACATGAAGAGTTTGGCATCATCCTGCTCGATAATCAGAATCAGTTGCTGCACCGCGA
AATCCTGTTCAGGGGTACGCTAAACTCGGTCAGCGTTCACCCCCGTGAAGTTATCAAGCGTGTGCTGAAAAATAATGCCG
CCGCAGTCATCCTTGTCCACAACCATCCCAGCGGCGAGCCGGAACCCAGTCGTTGCGATATTAAGTTGACCAAAAAGCTT
CAGGAACTGCTGGAAATGCTGGATGTGCGGTTACTTGACCACTTTATCGTGGCGGGGACTGAAACGGTGTCGATGGCTGA
GCGGGGGCTCGTGTGA

Protein sequence :
MVELAPLEHEEFGIILLDNQNQLLHREILFRGTLNSVSVHPREVIKRVLKNNAAAVILVHNHPSGEPEPSRCDIKLTKKL
QELLEMLDVRLLDHFIVAGTETVSMAERGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 3e-22 54
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 2e-22 54
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 7e-22 54
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 4e-22 54
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 3e-22 54
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 2e-22 54
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 7e-22 53
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 7e-22 53
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 5e-22 53
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 2e-21 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_03720 YP_008157589.1 DNA repair protein VFG1678 Protein 8e-23 54
M621_03720 YP_008157589.1 DNA repair protein VFG1617 Protein 8e-23 54
M621_03720 YP_008157589.1 DNA repair protein VFG1528 Protein 1e-22 54