Gene Information

Name : M621_25650 (M621_25650)
Accession : YP_008161864.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : lysine 6-monooxygenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5461516 - 5462829 bp
Length : 1314 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAACGAACCATTGGATTTACTGGGCGTTGGCCTGGGGCCATTCAATCTCAGCCTGGCAGCCATGGCCTTCGAAAGCGG
TGAGGTGAACTACGCCTTTCTCGATCGCAACGCCAGCTTTCGCTGGCATCCCGGCATGTTGTTACCCTCGGCGTATATGC
AGACTTACGTGCTGCAGGACTTGGTGACCGCCGTTGCGCCGCGCAGCCAGTTTTCATTTATCAATTATCTGGTCGAGCAG
AAAAAAATTTACCGTTTTCTGATCACCGAGCAGCAAATTATCAGCCGTGAAGAGTTCTCGGACTACCTAAGTTGGGCCTG
CGACAGATTAGATGGGCTACAGTTTTCGCAGTCGGTTGAAAGCATTGATTTTGACGATGACCAGCAGCTGTTTGAAGTCC
GTACTCTCAACCAAACCCTGTGGGCAAAAAACATCTGCCTGGGCACCGGCCACGATCCCTGGATCCCCGATGAGTTCTAC
CCGGCTCTGGGGGAAAATTGCCTGCATGCCGCAGAGATCGCCCTCCGCAATCCGGATCTTACCGGCAAGCGGGTTATGGT
GGTAGGCGGCGGCCAAAGCGGTGCCGATATTTTCCTCAATGCGCTGCGCGGGCATTGGGGAAAACCGGCGCAGCTGGACT
GGCTTTCCCGCCGGCCCAACTTCCAGCCTCTGGATGAATCCGCCTTCACCAATGAGTACTTCACCCCGGAATACGTCGAT
TATTTCTATACGCTGCCGCAAGATATCCGCGAGCGGGAAATCAAGGCGCAGAAGCTGCCCGCCGACGGCATCAGCAACCA
TACGCTGCGTACCCTGTATCGCGAGCTGTACATGCGTTTTGACGTAATGCACCAGACACGTAACGTACGCCTGTTGCCGC
ACCGAACGCTGTTGGCGATAGAGCCAACGGGAAAGGATTTCCAGTTGCGTGCCCGGCATGGCCTGGAAAATCGTCAGGAA
GGATTTAAGGCCGATATGGTCATTTTAGCCACCGGCTACCGCCCTTCGCTGCCTTCCTGCCTGAAACCGCTGTTGCCGCG
CATCCCCTTCGACAATCAACAGCACCTGCCGCTGTTACCGGATTTTAACCTTGAGTGGCAAGGGCCGGAGCAGAACCGGA
TTTATGCGGTGAATGCCGGTATCCACAGCCACGGCAGCGCTGAAGGCGGCCTGAGCCTGATGGCCTGGCGTTCTGCCCGC
ATCCTCAATCATTTGCTCGGCAAACCGCATTTTGATCTGACGCCAAATGCCTCGCTGATACAATGGTGGAGTGATGCGGC
GCCAGACAATGACATTCAAGAAACAGATAAATAG

Protein sequence :
MNEPLDLLGVGLGPFNLSLAAMAFESGEVNYAFLDRNASFRWHPGMLLPSAYMQTYVLQDLVTAVAPRSQFSFINYLVEQ
KKIYRFLITEQQIISREEFSDYLSWACDRLDGLQFSQSVESIDFDDDQQLFEVRTLNQTLWAKNICLGTGHDPWIPDEFY
PALGENCLHAAEIALRNPDLTGKRVMVVGGGQSGADIFLNALRGHWGKPAQLDWLSRRPNFQPLDESAFTNEYFTPEYVD
YFYTLPQDIREREIKAQKLPADGISNHTLRTLYRELYMRFDVMHQTRNVRLLPHRTLLAIEPTGKDFQLRARHGLENRQE
GFKADMVILATGYRPSLPSCLKPLLPRIPFDNQQHLPLLPDFNLEWQGPEQNRIYAVNAGIHSHGSAEGGLSLMAWRSAR
ILNHLLGKPHFDLTPNASLIQWWSDAAPDNDIQETDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD AAD44749.1 IucD Virulence SHI-2 Protein 7e-107 51
iucD AAK71634.1 IucD Virulence SHI-3 Protein 5e-107 51
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-106 51
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-106 51
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 6e-107 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_25650 YP_008161864.1 lysine 6-monooxygenase VFG1084 Protein 3e-107 51
M621_25650 YP_008161864.1 lysine 6-monooxygenase VFG0618 Protein 4e-107 51
M621_25650 YP_008161864.1 lysine 6-monooxygenase VFG0937 Protein 2e-107 51