Gene Information

Name : rph (M621_25240)
Accession : YP_008161786.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 5372049 - 5372765 bp
Length : 717 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; Derived by automated comput

DNA sequence :
ATGCGTCCTGCAGGCAGAGCACCACAACAAGTTCGCCCACTGACACTGACCCGTCACTATACCAAACACGCTGAAGGTTC
AGTGCTGGTTGAGTTTGGCGATACCAAAGTTTTGTGCACCGCCACGGTAGAAGAGGGCGTTCCGCGCTTCCTGAAAGGTC
AGGGCCAGGGTTGGATCACCGCCGAATACGGCATGCTGCCGCGCTCCACCCACAGCCGTAACGCTCGCGAGGCCGCAAAA
GGCAAGCAGGGCGGCCGTACGCTGGAAATTCAGCGCCTGATCGCCCGTTCGCTGCGTGCGGCGGTCGATCTGAAAAAACT
GGGTGAGTTCACCATTACCCTGGATTGCGACGTACTGCAGGCTGATGGCGGCACCCGCACCGCCTCCATTTCCGGTGCCT
GCGTTGCGCTGGCTGATGCGCTTAATGCATTGGTTGCTGCGGGCAAACTGAAGGCCAACCCAATGAAAGGGCTGGTGGCT
GCAGTGTCTGTCGGTATCGTCAAGGGCGAAGCGCTGTGCGATCTGGAGTACGTCGAAGACTCTGCGGCAGAAACCGATAT
GAACGTGGTGATGATGGAAGACGGCCGCATGATCGAGGTGCAGGGCACCGCCGAGGGCGAACCTTTCAGCCACGATGAGC
TGTTGGCGCTGTTGGCGCTGGCTCGAGGGGGCATCGAAACCATCTTCCAGGCGCAGAAAGCGGCGCTGGCAGAGTAA

Protein sequence :
MRPAGRAPQQVRPLTLTRHYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWITAEYGMLPRSTHSRNAREAAK
GKQGGRTLEIQRLIARSLRAAVDLKKLGEFTITLDCDVLQADGGTRTASISGACVALADALNALVAAGKLKANPMKGLVA
AVSVGIVKGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHDELLALLALARGGIETIFQAQKAALAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-53 57