Name : M621_24575 (M621_24575) Accession : YP_008161660.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Virulence Product : fimbrial protein SteB Function : - COG functional category : - COG ID : - EC number : - Position : 5223818 - 5226352 bp Length : 2535 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGTGTTTTTTCCTGCAGGGACGCGGTTTCGTATTCAGTTGTTAAGGGCCTGTATTTGCCTGGCGATAAGTTCTGCCGC ACCGCTGGCTTTTGCCGACGACGGCATACAGTTTAATACCGACGTGCTGGATGTGAACGACCGGAAAAATATCGACCTGA GCCAGTTCTCCCGTAGCGGCTACATGATGCCGGGGACCTACAGCCTGACGGTACACATCAATAAAAATGAGCTGCCGGAG CAGAGCGTTCCTTTTTATCCGCCTGACGATGATCCGAAAGGCAGCCAAGCCTGTCTTTCACCGGTATTGGTGGGCCAACT GGGGCTAAAGGCGGATGCGCTGAAAGGGTTACGCTGGTGGCACCAGGACGAATGTCTGGACATTACCAGCTTGAAGGGTA TGGAAGCCCGGGGCGATCTGGCTACCGCGGCGTTGTACCTGAGCATTCCCCAGGCTTATCTGGAGTACGCTTCGGCGGAC TGGGATCCGCCTTCGCGCTGGGATGAAGGTATTCCCGGGCTGTTGTTTGATTACAACCTTAATGGCCAGGCTCAGCACCA GCAGCGGGACGGCTCAAAAAGCTACACCCTGAGCGGCAACGGCACCACCGGCGCCAATCTGGGAGCTTGGCGGCTGCGCG CCGACTGGCAGGGGCAGTTTAACCGCCAGACCGGCAGCGGGCAGGGCACCGACCAGCAGTTGGACTGGAGCCGCTATTAC GCCTACCGGGCACTGCCGGCACTGCGTTCGCGGCTGACGCTGGGGGAGGCTTACCTCAACTCCGGTATGTTCGACAGCTT CCGCTTCAGCGGGGCCAGCCTGGTGTCGGACGACAACATGCTGCCACCGAATCTGCGTGGTTATGCGCCGGAGGTTGTGG GGGTGGCGAAGACCAACGCCAAGGTGACCATCAGCCAGCAGGGCCGGGTAATTTACGAAACCCAGGTGGCGGCGGGGCCG TTCCGCATTCAGGACATCAACGATGCGGTATCCGGCGAACTGGAGGTGCGGGTGGAGGAGCAGGACGGCAGTGTGCAGGC ATTCAAGATGAACACCGCCAGCATTCCGTACCTGACCCGGCCCGGTTCGGTGCGCTACAAGTTTGCCGCAGGGCGTCCGT CGGACTGGCAGCATCATGCTGACGGCCCGCTGTTCGGCACCGGGGAATTTTCCTGGGGGGTGAGCAACGGATGGTCGCTG TACGGCGGTGTGCTGGGCGGTGGCGATTATAACGCGGCGTCGTTGGGGATCGGCCGCGACCTGATGGCGCTGGGAGCCTT GTCGTTCGACGCCACCCAGTCGCGGGCGCGTTTGCCGCAGCAGGACGGCACGCTGAGCGGCGGCTCATACCGCCTGAGCT ATTCGAAGAGCTTTGACGAGTTGGACAGCCAGGTGACCTTTGCCGGTTACCGCTTCTCGGAACAAGACTTCATGAGCATG AGCGAGTATCTGGATGCTCGCCATGAGGGCCGCCGGATAGGCAATAACAAGGAGATGTACACCATCACCTTTAACAAGCA GTTCCGGGATGCGGGGATCAGCTTGTACCTGAACTACGACCACCAGACCTACTGGGATCGGCCGGTCAATGATCGTTATA ACCTGACGATGTCGCGCTACTTCGACATCGGGCGATTCAAGAACCTGAGCCTGTCGCTGTCCGGTTACCGTAACAAATAC AACGGCAGCAACGACGACGGTATGTATCTGTCGTTGACGATGCCGTGGGGGAGCAGTGCCAACGTCAGCTACAACACCGC GGTGAACCGTAACGACACCACCCATCGGGTGGGGTATTACGACCGGATTGACGAGCACAACAACTACCAGCTGAGCGCGG GCAGTTCGCGCGGCGGTGCCAACCTGAGCGGTTATTACAACCGCGAGGGTGATGTTGCCCAGATGAGCGCCAACGCCAGT TATCAGGAAGGCAGCTACAGCGCGCTGGGCTTCTCTGCTCAGGGCGGCGCGACGTTGACGACTCAAGGCGGCGCACTGCA CCGCATCGGCATGCCGGGTGCCACCCGCTTGCTGCTGGATACCGGCGGTGTGGCTGGGGTGCCGGTACGCGGTTACGGCA GCACCAGCAACACCAACAGGTTCGGCAAGGCGGTGGTGACGGACGTGAGCAACTACTACCGCAACCAGGCCAGCATTGAT CTGAACAAGCTGGGCGACAACGCCGAGGCTACCAAATCGGTGGTGCAGGCCACCCTGACCGAGGGCGCGATCGGTTACCG CAAATTTGACGTGATCGCCGGGGAGAAGGCGATGGCGGTGATCACCCTGGCGGATGGCAGCACCCCACCGTTCGGTGCAA CGGTGATGAACGCTAACAAGCAGGATACAGGGATTGTGAACGACGGCGGCAGCGTTTACCTGAGCGGCATTCAGGTCGGT GACCGCATGACGGTGCACTGGAACGGCGCGGCGCAGTGCGCCATCAGCCTGCCGAAAGTGCTGCCGGAAAGCACGCTGAG CAACCTGCTGTTGCCGTGCCAGGCATTGCCGGCGGCAGAGGCAGACGCGCAGTAA Protein sequence : MVFFPAGTRFRIQLLRACICLAISSAAPLAFADDGIQFNTDVLDVNDRKNIDLSQFSRSGYMMPGTYSLTVHINKNELPE QSVPFYPPDDDPKGSQACLSPVLVGQLGLKADALKGLRWWHQDECLDITSLKGMEARGDLATAALYLSIPQAYLEYASAD WDPPSRWDEGIPGLLFDYNLNGQAQHQQRDGSKSYTLSGNGTTGANLGAWRLRADWQGQFNRQTGSGQGTDQQLDWSRYY AYRALPALRSRLTLGEAYLNSGMFDSFRFSGASLVSDDNMLPPNLRGYAPEVVGVAKTNAKVTISQQGRVIYETQVAAGP FRIQDINDAVSGELEVRVEEQDGSVQAFKMNTASIPYLTRPGSVRYKFAAGRPSDWQHHADGPLFGTGEFSWGVSNGWSL YGGVLGGGDYNAASLGIGRDLMALGALSFDATQSRARLPQQDGTLSGGSYRLSYSKSFDELDSQVTFAGYRFSEQDFMSM SEYLDARHEGRRIGNNKEMYTITFNKQFRDAGISLYLNYDHQTYWDRPVNDRYNLTMSRYFDIGRFKNLSLSLSGYRNKY NGSNDDGMYLSLTMPWGSSANVSYNTAVNRNDTTHRVGYYDRIDEHNNYQLSAGSSRGGANLSGYYNREGDVAQMSANAS YQEGSYSALGFSAQGGATLTTQGGALHRIGMPGATRLLLDTGGVAGVPVRGYGSTSNTNRFGKAVVTDVSNYYRNQASID LNKLGDNAEATKSVVQATLTEGAIGYRKFDVIAGEKAMAVITLADGSTPPFGATVMNANKQDTGIVNDGGSVYLSGIQVG DRMTVHWNGAAQCAISLPKVLPESTLSNLLLPCQALPAAEADAQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 50 |
prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-163 | 47 |
papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 7e-162 | 47 |
papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 5e-162 | 47 |
papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 3e-163 | 47 |
papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 3e-163 | 47 |
papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 3e-163 | 47 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
M621_24575 | YP_008161660.1 | fimbrial protein SteB | VFG1548 | Protein | 1e-163 | 47 |
M621_24575 | YP_008161660.1 | fimbrial protein SteB | VFG0884 | Protein | 1e-163 | 47 |
M621_24575 | YP_008161660.1 | fimbrial protein SteB | VFG0895 | Protein | 1e-163 | 47 |