Gene Information

Name : M621_24360 (M621_24360)
Accession : YP_008161617.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : molecular chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5175353 - 5176093 bp
Length : 741 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAACAAAAATCTGACAGCAACCATTGGCCTGGCGCTGCTGACCGCCATTCCCGCCGCCCATGCGGCGATATCGCTGGA
TCGTACCCGCGCCATCTACGTCGGTGACGCGAAATCCATCAGCCTGAATATCGTTAACGAAAACAAGGAGCTGCCTTTCC
TGGCGCAATCCTGGCTGGAAAACGAACAGCATCAGAAAATCACCTCGCCGCTGGTGGTGCTGCCGCCGTTGCAGCGGGTA
GAAGCCGGCGAACGTAGCGTAGTGCGCATCACCAAGACCCCGGAGGCCGACCGCCTGCCCCAGGATCGCGAATCGGTGTT
CTATTTCAACTTGCGTGAAATCCCACCGAAAAGCAGCAAAACCAACGTGATGCAGCTGGCTTTGCAGACCCAGATCAAGC
TTTTTTACCGGCCGAAGGCCATCGTCGCGCCCAAAGGCGAAGTGTGGCAGGAGAAGTTGGTGTTCCGTAAAAGCGCCGGT
GGGTTCACCATCGAAAACCCCACGCCGTTTTATATCACCCTGACCGGCATCACCCGCCAGCCGCAGAAACAGGGCGGCGG
CGCGATAAACGACTTCGAACCCGTGATGCTGAAACCGAAATCCAGCGAAAGCGTGAAGCTGCGCGACAACGGCCTGAGCA
GCTTTGTCGTCACCTACATCAATGACTACGGCGGCCACCCCGAGCTGCGGTTCCAGTGCAACGGCACCCTCTGCACCGCC
GCGCCGGACGCGAAAAAATAA

Protein sequence :
MNKNLTATIGLALLTAIPAAHAAISLDRTRAIYVGDAKSISLNIVNENKELPFLAQSWLENEQHQKITSPLVVLPPLQRV
EAGERSVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIVAPKGEVWQEKLVFRKSAG
GFTIENPTPFYITLTGITRQPQKQGGGAINDFEPVMLKPKSSESVKLRDNGLSSFVVTYINDYGGHPELRFQCNGTLCTA
APDAKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 9e-60 56
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-58 54
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-58 54
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-58 54
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 3e-58 53
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 4e-58 53
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 4e-58 53
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 7e-54 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_24360 YP_008161617.1 molecular chaperone VFG1547 Protein 7e-59 54
M621_24360 YP_008161617.1 molecular chaperone VFG0896 Protein 2e-58 53
M621_24360 YP_008161617.1 molecular chaperone VFG0885 Protein 3e-54 52