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Name : M621_24355 (M621_24355) Accession : YP_008161616.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Virulence Product : fimbrial protein SteB Function : - COG functional category : - COG ID : - EC number : - Position : 5172823 - 5175324 bp Length : 2502 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAGTGATTATTCTATGACGTCATTACTGACACGGAAAAAAAGACCCCTTACCGTCATTCTATCTTTCCTCTGGGCGCA TTCGGCTTTTTCCGCCACGGAATTCAATACTGACGTATTGGATATCGGCGATCGCAGCAAAGTGGATTTATCGCGTTTTT CCGACGCCGATTACGTCATGCCCGGCACCTATCTGCTGGATATCAAGATCAACCAGAAAACCCTGCCGCAGCGCCGCATC CAATATTATCCGTCAGCGGATAAAAAGGACCGATCCCGCGCCTGTCTGCCGCCGGATCTGGTGGAAAAAATGGCGCTGAA AGAAGAAGCCGCCAAAAAAATCATCCTGTGGCACGATAACCAGTGCGCCGATATCAGCGGGATCAAAGGGGCGACCCTTT CCGATCGCATCGGCGGCGGAGTACTGACGATCACCATCCCGCAGGCATGGATGAAATATTCCGATCCGGACTGGACCCCG CCTGAACAATGGGACGACGGCATTCCCGGCCTGCTGCTGGATTACAGCCTCAGCGGCCAGGTCGGCAAGCAGAGTCACAA TAACAACACGTCGGAAAATCTCAGCAGCTACGGCACCCTGGGTGCCAACCTGGGCGCCTGGCGCCTGCGCGCCGATTATC AGGCCAATTACAACCAGCAGGCCGGCCAACGCGACAGCGGCTTTGACTGGAACCAGATCTACGCCTATCGCGCGCTGCCA ATGCAAGCAGCCAGACTGACGCTCGGCGAAATTTATCTCGACTCGAACGTGTTCGATTCCTATCGCTTTACCGGCATCAA TCTGGCCAGCGACGAACGCATGCTGCCGCCGAACCTGCAGGGCTATGCTCCGGAAGTGCGCGGCATCGCCAAGAGCAACG CCAAAATCACCGTTTCCCAGGAAGGCCGCACGCTGTACGAAACCACCGTGCCTGCCGGGCCGTTTGTGATCCAGGATCTC AGCAGTTCGGTACGTGGCCGACTGGACGTGAAGGTTGAAGAACAGGACGGCAGCGTCTCCACCTTCCAGGTCGATACCGC CACCATCCCTTATCTGACCCGCCCCGGCTATGTACGCTACAACGTCGCCCTGGGCAAACCCTCGGCTTACGATCACCGCA CGCAAGGGCCGCTGTTCTCCGCCAGTGATTTCTCCTGGGGGCTGAGCAGTGCCTGGTCACTGTACGGCGGCGCCTTGCTT GGCGACGATTACAACGCCTGGGCGCTCGGTCTGGGCCGTGACCTGAATATCTTCGGTGCCATGTCGGTGGACATGACGCA GTCAATCGCCCGTCTGCCAGACCAGCCGACTGCCAGCGGCATGTCGTTCAAGGTCAACTACGCCAAGCGTTTCGACGAGT TGAATAGCCAGATCACCTTCGCAGGCTACCGTTTTTCGCAGCGCAAATTCATGAGCATGTCGCAGTATCTGCAGGCGCGT TATAGCGACTATGACGATCGCTACAGCAGTCGCGAAAAAGAGCTGTACACCATCACCGCCAGCAAAACCTTTATGGCGGA AGACAGCGCCAAAGCGATCACCGCCTACCTGACCTATTCGCACCAAACCTATTGGGACAAGCGCGCGCAGGATCGCTACG GGCTGTCCGCCAGCAAATTGTTCAACGTCGGTAACATCAGCAACATCACCGCCTCGCTGTCGGCCTACCGTTCGACCTAT CAAGGGCGCACCGATGACAGCGTGATGCTGAATTTCACCGTGCCGATTGGCGATCGTCGCCGCATGGGTTACGCGTTGCA GACCAATAACAGCGACGTGACGCAAACCGCGTCCTACAACGATTACACCGATCCGAACAACACCTGGCAGCTAAGCGGCG GCTTTAACCAGTCCGGCAAAACCTTGACCAGCGGCTACTACACCCATAACGCCTCGTTCGGCTCACTCAACGCCAACGCT TCGTACCAACAAGACAGCTACTCCTCCGTCGGCGGTACTTTCCGCAGCGGTATCACCGCTACCCGGTACGGTATAGCGGC GCACCAGAACGCCAGCAATGGCGGCAGCCGGATGATGCTCGATACCGACGGCATCGCCGGGGTGCCGATCAACAACGGCC GCGCCTACAGCAACCGGTTCGGGCTGGCGGTGATTTCCGACATCACCAGCTACTACAACACCGATACCCGCATCGACGTC AACAAGCTGGCTGATGACGTGGAAGCCACCCGTTCGGTGGTGCAAGGCACGTTGACCGAAGGCGCCATCGGCTATCGCCA CTTTGAGGTAGTGAAAGGCAGCAAGCTGCTGGCCACCATCAAACTGGCCGACGGCAGCGAACCGCCGTTCGGCGCTACGG TGCTGAGCGAACGGGGCCGCGAAGTGGCGGTGGTGAACGACGGTGGGTCGGTTTATCTGACCGGTGTGCAACCACAGGAA AAATTGGACGTCGCCTGGGAGGGCCAGCGCCAGTGCCGCATCGTGATACCGGGCGCTGCCAAGCCGCTGGACCAGTTGCT GCTCCCCTGCGCCAAACTGTAA Protein sequence : MSDYSMTSLLTRKKRPLTVILSFLWAHSAFSATEFNTDVLDIGDRSKVDLSRFSDADYVMPGTYLLDIKINQKTLPQRRI QYYPSADKKDRSRACLPPDLVEKMALKEEAAKKIILWHDNQCADISGIKGATLSDRIGGGVLTITIPQAWMKYSDPDWTP PEQWDDGIPGLLLDYSLSGQVGKQSHNNNTSENLSSYGTLGANLGAWRLRADYQANYNQQAGQRDSGFDWNQIYAYRALP MQAARLTLGEIYLDSNVFDSYRFTGINLASDERMLPPNLQGYAPEVRGIAKSNAKITVSQEGRTLYETTVPAGPFVIQDL SSSVRGRLDVKVEEQDGSVSTFQVDTATIPYLTRPGYVRYNVALGKPSAYDHRTQGPLFSASDFSWGLSSAWSLYGGALL GDDYNAWALGLGRDLNIFGAMSVDMTQSIARLPDQPTASGMSFKVNYAKRFDELNSQITFAGYRFSQRKFMSMSQYLQAR YSDYDDRYSSREKELYTITASKTFMAEDSAKAITAYLTYSHQTYWDKRAQDRYGLSASKLFNVGNISNITASLSAYRSTY QGRTDDSVMLNFTVPIGDRRRMGYALQTNNSDVTQTASYNDYTDPNNTWQLSGGFNQSGKTLTSGYYTHNASFGSLNANA SYQQDSYSSVGGTFRSGITATRYGIAAHQNASNGGSRMMLDTDGIAGVPINNGRAYSNRFGLAVISDITSYYNTDTRIDV NKLADDVEATRSVVQGTLTEGAIGYRHFEVVKGSKLLATIKLADGSEPPFGATVLSERGREVAVVNDGGSVYLTGVQPQE KLDVAWEGQRQCRIVIPGAAKPLDQLLLPCAKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 49 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 5e-178 | 48 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 1e-176 | 48 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 8e-177 | 48 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 7e-178 | 48 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 5e-178 | 48 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 5e-178 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M621_24355 | YP_008161616.1 | fimbrial protein SteB | VFG1548 | Protein | 3e-178 | 48 |
| M621_24355 | YP_008161616.1 | fimbrial protein SteB | VFG0884 | Protein | 3e-178 | 48 |
| M621_24355 | YP_008161616.1 | fimbrial protein SteB | VFG0895 | Protein | 2e-178 | 48 |
