|
Name : rpsN (M621_23665) Accession : YP_008161480.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Unknown Product : 30S ribosomal protein S14 Function : - COG functional category : - COG ID : - EC number : - Position : 5034540 - 5034845 bp Length : 306 bp Strand : - Note : located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese DNA sequence : ATGGCTAAGCAATCAATGAAAGCACGCGAAGTCGTTCGCGTGAAACTGGCTGACAAGTACCGCGCTAAACGCGAGGAATT GAAAGCTATCATTTCTAGTGTGAACTCTTCCGACGAAGATCGTTGGGATGCTGTTCTCAAGCTGCAAACTCTGCCGCGTG ATTCCAGCCCGTCTCGTCAGCGTAAACGCTGCCGCCAAACTGGCCGTCCACATGGTTATGTGGGCAAATTCGGGTTGAGC CGTATCAAGTTACGTGAAGCCGCCATGCGCGGTGAAGTACCAGGCTTGAAAAAGGCTAGCTGGTAA Protein sequence : MAKQSMKAREVVRVKLADKYRAKREELKAIISSVNSSDEDRWDAVLKLQTLPRDSSPSRQRKRCRQTGRPHGYVGKFGLS RIKLREAAMRGEVPGLKKASW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpsN | NP_814350.1 | 30S ribosomal protein S14 | Not tested | Not named | Protein | 1e-11 | 47 |
| ef0103 | AAM75306.1 | EF0103 | Not tested | Not named | Protein | 8e-12 | 47 |
