Gene Information

Name : M621_23250 (M621_23250)
Accession : YP_008161403.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4945275 - 4946699 bp
Length : 1425 bp
Strand : -
Note : unwinds double stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGCAGGAAAAAAACCAACCAACAAAACTTACGCGGACGAAGCCAGAGATCGCCCTCGAGATCGCCAGATGGAAGGGCT
GAAGATGCCGCCACATTCGCTGGAGGCGGAACAGTCCGTGTTGGGCGGTTTGATGCTGGATAACGAACGCTGGGATAACG
TATCGGAACGCGTGGTCTCCAACGATTTCTTCAGCCGCCCGCACCGCCTGATCTTTACCGAGATGCAGCGGCTGTTGGAA
ATGAGCCGGCCTATCGATCTGATCACCCTGTCCGAATCGCTCGAGCAGCGCGGCGAACTGGATTCGGTGGGCGGTTTCGC
CTATCTGGCCGAGCTGTCGAAAAACACCCCAAGCGCCGCCAACATCGGCGCTTATGCCGACATCGTGCGTGAACGTGCGG
TCGTACGCGAAATGATCTCGGTAGCCAATGAGATCGCCGACGCCGGTTACGATCCGCAGGGCCGCAGCAGCGAAGATCTG
CTCGATCTGGCCGAGTCGCGGGTATTCCAGATCGCGGAAAATCGCGCCAGTAAAGATGAAGGCCCGAAAGGCATCGAGCG
TATTCTGGAAGACACCGTTTCGCGTATCGAACAGCTGTATCAGCAGCCGCACGACGGCGTTACCGGGGTAGACACCGGCT
ATCAGGATCTCAATAAGAAAACTGCCGGTTTGCAAAAATCGGACCTGATCATCGTCGCCGCCCGTCCTTCGATGGGTAAA
ACCACTTTCGCCATGAACCTGTGCGAACACGCTGCCATGACGCAGGAAAAGCCGGTGCTGATCTTCAGCCTGGAGATGCC
CGGCAACCAGATCATGATGCGTATGCTGGCGTCGCTGTCGCGCGTCGACCAGACGCGTATCCGTACCGGTCAGCTCGACG
ACGAGGACTGGGCGCGCATTTCCAGCACCATGGGCATCCTGCTGGAGAAGCGCAATATGTACATTGACGACTCCTCCGGC
CTGACGCCAACCGAAGTGCGCTCCCGCGCGCGCCGTATTTTCCGCGAACATGACGGCCTCAGCCTGATCATGATCGACTA
CCTGCAGCTGATGCGTGTGCCGGCCCTGTCCGACAACCGTACGCTGGAAATCGCCGAAATCTCCCGCTCGCTGAAGGCGC
TGGCGAAAGAGCTGCAGGTGCCGGTGGTGGCGCTGTCGCAGCTGAACCGAAGCCTGGAGCAGCGCGCCGACAAACGCCCG
GTCAACTCAGACCTGCGTGAGTCCGGTTCCATCGAGCAGGATGCCGACCTGATCATGTTCATCTACCGTGATGAGGTTTA
TCACGAGAACAGCGACATGAAAGGGATTGCCGAAATTATTCTGGGTAAGCAGCGTAACGGCCCGATCGGTACCGTGCGCC
TGACCTTTAACGGCCAGTGGTCGCGTTTCGATAACTACGCGGGGCCACAATATGATGATGAATAA

Protein sequence :
MAGKKPTNKTYADEARDRPRDRQMEGLKMPPHSLEAEQSVLGGLMLDNERWDNVSERVVSNDFFSRPHRLIFTEMQRLLE
MSRPIDLITLSESLEQRGELDSVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDL
LDLAESRVFQIAENRASKDEGPKGIERILEDTVSRIEQLYQQPHDGVTGVDTGYQDLNKKTAGLQKSDLIIVAARPSMGK
TTFAMNLCEHAAMTQEKPVLIFSLEMPGNQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSG
LTPTEVRSRARRIFREHDGLSLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRP
VNSDLRESGSIEQDADLIMFIYRDEVYHENSDMKGIAEIILGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-98 53
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-104 52
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-104 52
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-103 52
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-100 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 9e-90 49
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 9e-90 49
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-85 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 3e-79 46