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Name : gabD (M621_22470) Accession : YP_008161248.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 4778274 - 4779728 bp Length : 1455 bp Strand : - Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAACTGAATAATCCCGAGCTGCTGCGCAGCCAGTGCCTGATTAACGGTGAGTGGTGCGACGCGTTGAGCGGCCGGCG TGAAGCGGTCATCAACCCGGCGACCGGTGCTGAGCTGGCAAGCATTCCGTTGGTCAGCGAAGAAGAAACGCAGCAGGCGA TTAACGCGGCGCAGTTGGCGCAGCAGGGCTGGAAACAGCTGACCGCCAAACAGCGCTCCGTGCTGTTGCTGGCCTGGGCC GACAAGGTGCTGGCGGCCCAAGAGGATTTGGCGCAGCTGATGACCGCCGAGCAGGGTAAATCGCTGGCGGAAGCGCGCGG TGAAGTCGCCTATGCCGCTTCGTTTATTACCTGGTTCGCCGAAGAGGCCAAGCGTGTCGACGGTGCCGTGTTGCAAGCGC CGCTGGCCTCGCAGCGCCTGGTGGTAGTGAAACAGCCGATCGGCGTTTGCGCGGCGATCACGCCGTGGAACTTTCCGGCG GCGATGATCACCCGCAAGGTTGCGCCGGCGTTGGCTGCGGGCTGCGCGATGATCGTCAAACCGGCCGAACAGACGCCGCT GACCGCGTTGGCGTTGGCGAAGCTGGCGCAGGATGCCGGCATTCCGCCAGGCGTGTTGCAGGTGGTGACCGGCGACGCGG CGCAGGTAGGCAAGGTGCTGTGCGACAGCCCGGTGGTACGCAAACTGAGCTTTACCGGTTCGACCGAGGTCGGCCGCATT CTGATGGCGCAGTGCGCGCCGACGATTAAAAAACTGTCGCTGGAGCTGGGGGGCAACGCGCCGGTGATCGTTTTCGACGA CGCCAATCTGGACGCGGCGGTGGCGGGCATTATGGCCTCCAAGTTCCGTAACAGCGGCCAGACCTGCGTCTGCGCCAACC GCATCTACGTGCAGGACGGCATCTACGATCGTTTGGTGGACAAGCTGGTGGCGGCGGTTGAGCAACTGAAGGTCGGTGAC GGCAGCCATGAAGGCACCACTCAGGGGCCGCTGATCGACCAGGACGCGGTGGATAAAGTGCAGAGCCACATTGACGATGC GCTGATTAAAGGCGCGCAAATTGCTATCGGCGGGCAGCCGCACGAACTGGGTCGAACCTTCTTCCAACCGACGGTGGTGA CCGGCGTGACGCAAAAAATGCGCTTCGCCCGGGAAGAAACCTTTGGCCCGGTGGCGCCGCTGTTCCGTTTCCATGATGAA GCGGAAGCGATCGCCATGGCCAACGACACCGAATTCGGTCTGGCCGCTTATCTGTTTACGCAGAGTGCCTCGCGCCAATG GCGAGTGCCGGAAGCGCTGGAATACGGCATGGTCGGCATCAACACCGGGCTGATCTCCAATGAAGTCGCGCCGTTTGGCG GTGTGAAGCAGTCAGGACTCGGACGTGAAGGATCGCGTTACGGCATTGAAGAATATCTGGAGCTGAAATACCTGTGTATC GATGTGAGCTGTTAA Protein sequence : MKLNNPELLRSQCLINGEWCDALSGRREAVINPATGAELASIPLVSEEETQQAINAAQLAQQGWKQLTAKQRSVLLLAWA DKVLAAQEDLAQLMTAEQGKSLAEARGEVAYAASFITWFAEEAKRVDGAVLQAPLASQRLVVVKQPIGVCAAITPWNFPA AMITRKVAPALAAGCAMIVKPAEQTPLTALALAKLAQDAGIPPGVLQVVTGDAAQVGKVLCDSPVVRKLSFTGSTEVGRI LMAQCAPTIKKLSLELGGNAPVIVFDDANLDAAVAGIMASKFRNSGQTCVCANRIYVQDGIYDRLVDKLVAAVEQLKVGD GSHEGTTQGPLIDQDAVDKVQSHIDDALIKGAQIAIGGQPHELGRTFFQPTVVTGVTQKMRFAREETFGPVAPLFRFHDE AEAIAMANDTEFGLAAYLFTQSASRQWRVPEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSRYGIEEYLELKYLCI DVSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 8e-140 | 64 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-78 | 42 |
