Gene Information

Name : M621_21450 (M621_21450)
Accession : YP_008161048.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4526356 - 4527405 bp
Length : 1050 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTCGCAATACTTCTATTTAAACTAGGGGAAATCATGCATAAATCGCGTGTTATGGACTGGGACACTTTGCTCGAAGA
GTATTTTTTCTCAAAGGTGTTACGCCCGGAAACTGAGAGGAGCTATCGCAGAGTGGTTGCCGTTTTCAGAAAATTTATTG
GGTATGACACGTTACCGGATGAAGTCACGAACCGAGAGCTGATTTTGTGGCGTAGAGACATGTTGGGAAGGGGTTTAACA
AGAAGTACGTGGAATAATAAAGCTCGGCATTTGCGTGCGATTTACAACCAGGGGATGAAGAAAAAATGGCTCAACGTAGA
GGAAAATCCGCTAAATGAAACGCAAGTGCCGCCGGGTAACAAGCGTAAAAAAACACTGAACCGTGACCAGTTGGTTAAAG
TGAATCTGGTATTAGAACAATTTGAAGAACGCGAAAAATTAAGGGTAGGTAAATGTCGTCCTTGTGCGCTCTTTCCTGTG
TGGTATTGGCGGACTGTCATAGACGTCTTGCGTTCGACTGGGATGCGGCAAAACCAGTTATTACATATACGACTAATGGA
TGTAGATCTGGAGGCAAACTCGATGTTGCTGTGTAAAGAAGGCAGTAAAACGCATCGCGAGTGGTTAGTTCCTATCGTGA
GCTTTATCCGTGAACGGATGCGAATACTTGTTGATCGTGCGATAGCACAGGGGGCCGAACCGGCAGGTTATCTGTTCGAT
GTAGCACGATTCTTGAATCCATTGGGTGACGTTGACTCAGAACCTGCAATCCAACCTGTTCGCTCATTCTTCACCAGGCT
GACGAAAGAGTGTGGCTTTAAGGTGAGTCCGCATCGATTCAGACATACCCTGGCTACCGAAATGATGAAGTCACCCGATC
GTAATTTGGCAATGGTTAAAGGTTTGCTTGGACATCGCAGCGTCAGCACAACAATGGAATATGTCGAACTGGATTTAAAG
GTTACCGGTCAAGCGTTAGAGAATGAGCTGTCACTGTATATGGATGTGATACCAGCGCGTGAAAGTGAGGCCAGACTCGT
CTTGACATGA

Protein sequence :
MFAILLFKLGEIMHKSRVMDWDTLLEEYFFSKVLRPETERSYRRVVAVFRKFIGYDTLPDEVTNRELILWRRDMLGRGLT
RSTWNNKARHLRAIYNQGMKKKWLNVEENPLNETQVPPGNKRKKTLNRDQLVKVNLVLEQFEEREKLRVGKCRPCALFPV
WYWRTVIDVLRSTGMRQNQLLHIRLMDVDLEANSMLLCKEGSKTHREWLVPIVSFIRERMRILVDRAIAQGAEPAGYLFD
VARFLNPLGDVDSEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLGHRSVSTTMEYVELDLK
VTGQALENELSLYMDVIPARESEARLVLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3686 YP_001402640.1 phage integrase Not tested YAPI Protein 1e-64 48
YE3450 YP_001007614.1 phage integrase Not tested YAPI Protein 1e-65 48
api95 CAF28569.1 putative phage integrase Not tested YAPI Protein 8e-65 48
STY4666 NP_458745.1 probable phage integrase Not tested SPI-7 Protein 3e-69 45
t4357 NP_807950.1 phage integrase Not tested SPI-7 Protein 3e-69 45
PMI2549 YP_002152268.1 phage integrase Not tested Not named Protein 3e-63 43