Gene Information

Name : M621_21120 (M621_21120)
Accession : YP_008160984.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : iron-hydroxamate transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4454996 - 4455793 bp
Length : 798 bp
Strand : -
Note : part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCAGGATAAACACCTCGATCACGACGCCACTTTCGCGTTAGACAACGTCAGCTTTGCCGTTCCCGGCCGTGTGCTGTT
GCAACCGCTGTCGCTGACCTTTCCCCAGGGCAAAGTCTGCGGGCTGATCGGTCACAATGGTTCCGGCAAATCCACATTGC
TGAAAATTCTTGGCCGCCATCAGAACCCGACCGCCGGCAGCGCGCAGCTTAACCGACGCCCGCTGGCGCAATGGGACAGC
AAAGCCTTCGCGCGTCAGGTCGCCTATCTGCCCCAGCAACTGCCCGCAGCAGAAGGCATGACGGTACGCGAGCTGGTGGC
GATCGGCCGCTATCCGTGGCACGGTGCGCTGGGCCGCTTTGGCGTGAACGACCGCGAACAGGTGGAAGAAGCGATAGCGC
TGGTTGGCCTGAAACCCTTCGCCAACCGCCTGGTGGACAGCCTGTCCGGCGGCGAGCGGCAACGTGCCTGGCTGGCGATG
ATGGTGGCGCAGGACAGCCGCTGCCTGCTGTTGGACGAGCCGACCTCTGCGCTGGACATTGCGCACCAGGTTGAGGTGTT
GGCGCTGATTCAACGCCTGAGCCATGAACGTGGCCTGACGGTGATTGCGGTGCTGCACGACATCAACATGGCGGCGCGCT
ACTGCGACCATCTGGTGGCGTTGCGCGGTGGCGAGATGATTGCGCAAGGTGCCCCGCTGGAACTGATGCAAGGGCCGGTG
CTGGAGCAAATTTATGGTATTCCAATGGGCACGCTGGCGCATCCGAGCGGCGGTGCGCCGGTGAGTTTTGTCTACTGA

Protein sequence : 
MQDKHLDHDATFALDNVSFAVPGRVLLQPLSLTFPQGKVCGLIGHNGSGKSTLLKILGRHQNPTAGSAQLNRRPLAQWDS
KAFARQVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGVNDREQVEEAIALVGLKPFANRLVDSLSGGERQRAWLAM
MVAQDSRCLLLDEPTSALDIAHQVEVLALIQRLSHERGLTVIAVLHDINMAARYCDHLVALRGGEMIAQGAPLELMQGPV
LEQIYGIPMGTLAHPSGGAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-41 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-41 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_21120 YP_008160984.1 iron-hydroxamate transporter ATP-binding protein BAC0164 Protein 3e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_21120 YP_008160984.1 iron-hydroxamate transporter ATP-binding protein VFG0925 Protein 9e-43 43
M621_21120 YP_008160984.1 iron-hydroxamate transporter ATP-binding protein VFG1042 Protein 3e-41 42