|
Name : araD (M621_20930) Accession : YP_008160946.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.4 Position : 4412197 - 4412898 bp Length : 702 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGCTAACTCTGCCGCAGCTTAAACAACAGGTGCTGGAAGCCAACCTCGACCTGCCCCGCCACAATCTGGTGACCTTCAC CTGGGGCAATGTCAGCGCGGTGGACCGCGAACGCGGGCTGGTGGTGATCAAGCCTTCCGGCGTGGAATACGAGCATATGG CAGCCGAGGATATGGTGGTGGTGGATCTCGCTAGCGGCCGCACCGTCGAGGGAAGCAAGAAGCCGTCTTCAGATACCGCT ACCCACCTGGCGCTGTACCGTGAATTCGCCGATATCGGCGGTATCGTACACACCCATTCGCGCCACGCCACCATCTGGGC GCAGGCCGGGCTGGACATTCCCGCCTGGGGCACCACCCACGCCGACTACTTCTACGGCGCCATCCCCTGCACCCGGCTGA TGACCGAGCAGGAGATTGAACATGACTATGAGCTGGAGACCGGCAAGGTGATTATCGACACCTTCCGCCGGCGCGGCATC AGCCCCAACGCCATTCCGGCGGTGCTGGTGAATGCGCATGGCCCGTTCGCCTGGGGCAAGGATCCGCACAACGCGGTGCA CAATGCGGTGGTGCTGGAAGAAATTGCCTATATGGGGATTTTTTCACGCCAGCTGACGCCGGGTATCGGCAGCATGCAGC AAGAGTTGCTGGATAAACACTATCTGCGCAAGCACGGCAAGAACGCCTATTATGGGCAATAA Protein sequence : MLTLPQLKQQVLEANLDLPRHNLVTFTWGNVSAVDRERGLVVIKPSGVEYEHMAAEDMVVVDLASGRTVEGSKKPSSDTA THLALYREFADIGGIVHTHSRHATIWAQAGLDIPAWGTTHADYFYGAIPCTRLMTEQEIEHDYELETGKVIIDTFRRRGI SPNAIPAVLVNAHGPFAWGKDPHNAVHNAVVLEEIAYMGIFSRQLTPGIGSMQQELLDKHYLRKHGKNAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 1e-61 | 55 |
