Gene Information

Name : M621_20500 (M621_20500)
Accession : YP_008160862.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : fimbrial assembly chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4323201 - 4323878 bp
Length : 678 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAAGCAGGATATTTCACGTTGGTTGCAGCGTTGCTGATGATGTTTTGGGTGCCTGCCCAGGCTGGGGTGGTGGTGGG
CGGGACCCGTCTGATTTATGACGGTGCCAAAAAAGAGTCTGCATTGAATATCAGCAATCCGGACGCCGAGCCATACCTGA
TCCAATCGTGGGTTGACGCGCAAGAGGGCGACAGTGCCAAAGCGCCTTTTATCATTACGCCACCACTTTTCCGGCTGGAT
GGCGGGCAAAATAACCTTTTGCGGGTAGTGCGCGCGGGCGGCAATCTGCCGTCAGACAGAGAGTCGCTGTATTGGCTGAA
CGTAAAAGCCATTCCGTCGGTAGAGAAGAAAGACAACACGTTGCAAATTGCGATCAAGACTCGCATCAAGCTGATTTATC
GCCCGCAAGGCCTGTCCGGCAATCTGGAGGAGGCGGTCGGCAAGCTGACGTGGCAGCGCAGCGGCAACGCTTTACGGGTG
ACCAACCCGTCTCCTTATTACCTCACCTTTTTCAATTTAAAGCTCAACGGCAGCGCTGTTGCCGGCAGCACTATGGTTGC
GCCGCAGGCCACCGCCAGTTTCCCGCTGTCTGCGGGGGGGAGTGCAGGTGGAAACCTCAGTTGGCAAATAATCAATGACT
ACGGAGGTACCGGGAAGACGTTCGCCAGTACGTTATAA

Protein sequence : 
MKAGYFTLVAALLMMFWVPAQAGVVVGGTRLIYDGAKKESALNISNPDAEPYLIQSWVDAQEGDSAKAPFIITPPLFRLD
GGQNNLLRVVRAGGNLPSDRESLYWLNVKAIPSVEKKDNTLQIAIKTRIKLIYRPQGLSGNLEEAVGKLTWQRSGNALRV
TNPSPYYLTFFNLKLNGSAVAGSTMVAPQATASFPLSAGGSAGGNLSWQIINDYGGTGKTFASTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-38 46
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-37 46
phfC AAO17171.1 PhfC Virulence tcd island Protein 2e-42 43
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 4e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_20500 YP_008160862.1 fimbrial assembly chaperone VFG0911 Protein 7e-38 46
M621_20500 YP_008160862.1 fimbrial assembly chaperone VFG1644 Protein 8e-38 46
M621_20500 YP_008160862.1 fimbrial assembly chaperone VFG0455 Protein 3e-38 44
M621_20500 YP_008160862.1 fimbrial assembly chaperone VFG0445 Protein 2e-39 43
M621_20500 YP_008160862.1 fimbrial assembly chaperone VFG0875 Protein 1e-37 43