Gene Information

Name : M621_19635 (M621_19635)
Accession : YP_008160697.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4145923 - 4146381 bp
Length : 459 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACGACACAGACTCAACGCGAATTGATATCCGCTAATGAACCTCAATTTGACCTTACTGCAACACCAGTACCTGACGA
ACAGCGTCTCGATTTCTGGCCACTGCACTTTGGCGCTATCCCGCAGTGGATAACGCTGGAAACCCGTATTTTCGCCCGGA
TGGACCGCTTCTGTGATGAGTATAACGGCGGTATCTGGTCCTTTTACACGCTCTGCAATGGTGGCGCGTTTATGGCTCCT
GATGCTGACAGTAACGATAAATGGCATCTGTTCAACGGCATGAACGGCAATGGTGCGGAAATGAGCGCAGAAGCCGCAGG
TATCGCTGTCTGCCTGATTGAATACAGCCATCACGCCTGTCGCACCGAATGCGATGCCATGACTGAGCACTATTACCGCC
TGCGGGATTACGCCCAGCAGCACCCTGAATCCCACGCCATTTTTCGCATTATTGATTAA

Protein sequence :
MTTQTQRELISANEPQFDLTATPVPDEQRLDFWPLHFGAIPQWITLETRIFARMDRFCDEYNGGIWSFYTLCNGGAFMAP
DADSNDKWHLFNGMNGNGAEMSAEAAGIAVCLIEYSHHACRTECDAMTEHYYRLRDYAQQHPESHAIFRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 2e-42 73
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 4e-42 72
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 4e-42 67
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 4e-42 67
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-42 67
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 2e-43 67
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 2e-43 67
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 4e-46 67
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-46 67
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 7e-44 66
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 2e-44 66
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 5e-45 66
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 9e-44 66
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 3e-41 65
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-42 65
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-42 65
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-42 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_19635 YP_008160697.1 hypothetical protein VFG0659 Protein 1e-42 67
M621_19635 YP_008160697.1 hypothetical protein VFG1677 Protein 6e-47 67
M621_19635 YP_008160697.1 hypothetical protein VFG1527 Protein 2e-46 67
M621_19635 YP_008160697.1 hypothetical protein VFG1616 Protein 7e-45 66