Gene Information

Name : M621_19610 (M621_19610)
Accession : YP_008160692.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4143295 - 4144005 bp
Length : 711 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGCACAGGCAGAGCGCCGTCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGACTGGTTGCCGGTGAGAC
GCTGAACATGGCCCGGCTTGCTGCAGAGTTTGGTGTGTCAGTCCGTACCCTGCGACGGGATTTTCGCGAACGGTTGATGT
ATCTGGATCTGGAGTATCGACGAGGGCAATGCCGCCTGCGCAGCACCGGTGGGGGAGTACAGGGAGAGTTGGATGCGCTG
ACCTTTGCGCATCGGGCCGGACTGGCCGATATCTTTCCGGGGCTGGATCGGCGTCTGGCGGGCATGTTGCTCACAGCAGG
AGGGATGCCCTGCCTGGTATGGCAGCCGCCACAGCCTATGTCACCGGCTTGCTCACAGGTGTTTTACCGTCTCGTCAGTG
CCATTACCGCCTGCCAGCGCGTGCTGCTGCTGGCCGAGGGAGATCGCTGTGACGGACTGGCCCCGTACCGCCTGATATTA
CTTGACGGTTGCTGGTATCTCACCGGTGAACTGAATGGACATATCACCGTGCATCCTCTCGCGGTCATTCATGCAGTGAC
AGTCCTCAACACCATGTTTACCCCGCGAAAACGTCTCAGCCAGTTAACCACACAGGAGAGCTTTATACAGGCTCTTCCGC
ACTTCAACTGTATCCGCGAAGTCCTGTCTCTTGCTTCCTGTGACGAGGAGCCGGGCAAGACACTGATTTAA

Protein sequence : 
MAQAERRHDRLAVRLSLIISRLVAGETLNMARLAAEFGVSVRTLRRDFRERLMYLDLEYRRGQCRLRSTGGGVQGELDAL
TFAHRAGLADIFPGLDRRLAGMLLTAGGMPCLVWQPPQPMSPACSQVFYRLVSAITACQRVLLLAEGDRCDGLAPYRLIL
LDGCWYLTGELNGHITVHPLAVIHAVTVLNTMFTPRKRLSQLTTQESFIQALPHFNCIREVLSLASCDEEPGKTLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 6e-39 42
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 6e-39 42
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 4e-39 42
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 3e-39 42
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 1e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_19610 YP_008160692.1 transcriptional regulator VFG1523 Protein 2e-39 42
M621_19610 YP_008160692.1 transcriptional regulator VFG1613 Protein 3e-39 42