Gene Information

Name : M621_19605 (M621_19605)
Accession : YP_008160691.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4142262 - 4143086 bp
Length : 825 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACCCGTCTGGCTTCGCGCTTTGGCGCAGCAAATCTTATCCGTCGTGACCGTCCGCTAACCCGCGAAGAGCTGTTTCG
TGTGGTGCCCAGCGTATTCAGCAAGGACAAACACGCATCCCGCAGTGAGCGGTACACGTATATACCCACCATCTGCCTGC
TGGACAGCCTGCAGCGGGAGGGCTTCCAGCCGTTCTTTGCCTGCCAGACCCGTGTACGTGACCCTGGTCGCCGCGAGCAT
ACAAAGCATATGCTGCGCCTGCGCCGGGAGGGGCAAATTACCGGCAAACAGGTCCCGGAAATTATTCTGCTCAACTCCCA
TGATGGCACCAGCTCGTATCAGATGCTGCCGGGATTATTCCGTGCGGTATGCCAGAACGGGCTCGTCTGCGGTGAGTCGT
TTGGCGAGGTGCGGGTGCCGCATAAAGGAGATGTCGTGAGTCAGGTGATTGAGGGGGCGTATGAAGTGCTGGGTATTTTT
GACCGTGTGGAAGAGAAGCGGGATGCCATGCAGTCGCTGATGCTGCCGCCACCTGCACAACAGGCTCTGGCACAGGCTGC
ACTGACGTACCGTTTCGGAGATAACCATCAGCCGGTTGCGCCATCACAGGTGCTGTCTCCACGCCGCTGGCAGGATGAGA
GTAATGACCTGTGGACCACCTACCAGCGTATTCAGGAGAACCTGATTAAGGGCGGGCTCAGTGGACGGAGTGCGAAAGGC
GGACGAACGCATACTCGTGCAGTACGCGGTATTGACGGTGATGTGAAGCTTAACCGGGCACTGTGGGTAATGGCGGAGGC
CATGCTGAGTGGGTTTCAGTCCTGA

Protein sequence :
MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSKDKHASRSERYTYIPTICLLDSLQREGFQPFFACQTRVRDPGRREH
TKHMLRLRREGQITGKQVPEIILLNSHDGTSSYQMLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIF
DRVEEKRDAMQSLMLPPPAQQALAQAALTYRFGDNHQPVAPSQVLSPRRWQDESNDLWTTYQRIQENLIKGGLSGRSAKG
GRTHTRAVRGIDGDVKLNRALWVMAEAMLSGFQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-93 76
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-93 76
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-93 76
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 8e-94 75
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 8e-94 75
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 8e-94 75
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 3e-93 74
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 3e-93 74
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 3e-93 74
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 6e-95 74
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 6e-95 74
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 5e-95 74
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-95 74
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 2e-92 74
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-93 73
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 7e-73 57
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 5e-75 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_19605 YP_008160691.1 hypothetical protein VFG0658 Protein 2e-93 74
M621_19605 YP_008160691.1 hypothetical protein VFG1526 Protein 3e-95 74
M621_19605 YP_008160691.1 hypothetical protein VFG1676 Protein 1e-92 74
M621_19605 YP_008160691.1 hypothetical protein VFG1615 Protein 5e-94 73