Gene Information

Name : M621_19565 (M621_19565)
Accession : YP_008160683.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4129480 - 4130721 bp
Length : 1242 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTATCAGCTTTATGA
TGGTGACGGGCTTACTCTGTTAATCAAGTCCAGCGGTAGTAAGCTCTGGCAGTTACGTTACTATCGACCTCTGACAAAGC
AGCGAACCAAGCAGAGCTTCGGTGCCTACCCTACTGTCTCACTCTCTGATGCGCGGAAACTCAGAGCCGAATCTCGAGCT
TTATTGGCGAAAGACATTGATCCTCAGGAACATCAGAAAGAGCAGGTGAGAAATTCTCAAGAGGCCAAAACCAACACTTT
CATGTTAGTTGCCGAGCGTTGGTGGAATGTAAAGAAAGTTAGCGTAACAGAGGACTACGCCGACGATATCTGGCGCTCGC
TTGAGAGAGATGTTTTCCCCGCAATCGGTGATATCAGTGTCACTGAGATTAAGGCACATACTCTGGTTAAAGCAGTGCAG
CCGGTTCAAGCTAGAGGTGCATTAGAGACTGTTCGCCGCCTTTGTCAGCGTATTAACGAAGTCATGATTTATGCGCAGAA
CACAGGCCTGATTGATGCGGTTCCCAGCGTGAACATTGGGAAAGCATTCGAGAAACCGCAAAAGAAAAACATGCCAAGTA
TTCGACCGGATCAACTTCCACAGCTAATGCAAACTATGCGTACGGCAAGTATCAGCCTGTCCACAAGATGTCTGTTCATG
TGGCAGCTTCTCACCATCACCCGCCCTGCTGAAGCGGCTGAAGCTCGCTGGGATGAAATTGATTTGGAAGCGCGTGAATG
GAAAATCCCCGCATCACGGATGAAAATGAACCGTGACCATACTGTGCCTTTGTCAGATGAAGCAATAGCTGTGCTGGAGG
TGATGAAATCGTTTAGCGGGAACCGAGAATTTATCTTTCCTAGTCGTATCAAGCCCAACCAGCCAATGAATAGCCAGACC
GTTAACGCATCGCTAAAACGTGCAGGTTTTGGTGGGGTGCTTGTTTCACACGGACTGCGATCAATTGCTAGTACTGCCCT
TAATGAGCAGGGTTTTCCACCCGATGTTATTGAAGCGGCTCTTGCTCATGTGGATAAAAATGAGGTACGCCGCGCTTACA
ACCGCAGCGATTACCTTGAGAAACGTCGTCCGATGATGCAGTGGTGGGCTGATTTTGTAAAATCGGCTGATAACGGGAGT
ATAGTTGAGATTGGCTCCAAAAGATTAAAACTTGTTGGATAA

Protein sequence : 
MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQLRYYRPLTKQRTKQSFGAYPTVSLSDARKLRAESRA
LLAKDIDPQEHQKEQVRNSQEAKTNTFMLVAERWWNVKKVSVTEDYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQ
PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFM
WQLLTITRPAEAAEARWDEIDLEAREWKIPASRMKMNRDHTVPLSDEAIAVLEVMKSFSGNREFIFPSRIKPNQPMNSQT
VNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHVDKNEVRRAYNRSDYLEKRRPMMQWWADFVKSADNGS
IVEIGSKRLKLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 3e-110 54
int AAK20773.1 integrase Not tested VPI Protein 3e-110 54
int AAK20803.1 integrase Not tested VPI Protein 3e-110 54
unnamed AAA82714.1 integrase Not tested VPI Protein 3e-110 54
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 3e-110 54
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 3e-109 51
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 3e-86 46
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 6e-86 46
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 6e-86 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_19565 YP_008160683.1 integrase VFG1092 Protein 3e-86 46