Gene Information

Name : M621_18690 (M621_18690)
Accession : YP_008160509.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : protein disaggregation chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3929374 - 3932091 bp
Length : 2718 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCAAAATGGTCAGAGGAAATCCATTGCCATCTGTGATTACGATTACCGGCAATTGACGCGCCACCAAAATATTCTCAA
TCCTTTCGACTCCCTGTTGGGTGGCGGCGGTGCCTTATCGCGTTTCTTTAATGAGTTAACGGAAGACGAAGCGGCGGAAG
AAGCGTCCGGGTTTTCTGCGGAAGTCCCGCGCGAATCCGTCGATGCCACCGACGCCTTCAGCAAACAAACGCTTGAGCTG
CTGCAACGCGCGGCAGAAAAAGCGCATGAACTGCACCGCAGTGAACTTGATACCGAGCACCTGCTGTATGTGTTGGCGGA
TACCGATGTCTGTTCCGCCCTGCTGACAGAACTCAAATTGTCGCCGCAGGACATCAAGGCTTACATTGACCAGCATGCTT
ACAAGGGGGCCGCCGAAACCGGCGCCACTCTGGAAGACATGACGGTCTCCCCACGGCTGAAAAAAGCCTTCATGTACGCT
TTTCAGGTCTCCCGCGATTTGGGCCATTCCTACGTTGGCCCGGAGCATTTGCTGATCGGGCTCAGTGAAGTGCCGGACAG
CATTGCCGGCGCCCTGTTGAAAAAATACGGCGTCACCCCAGCCGCTCTGCGCCAGAAAGTAGTGAAGCTTGTGGGGAAAG
GTGCGGAAGACGGCCGTATCGACACCCCGACGGGCACGCCAACGCTGGATAAGTTTGGCCGCGATCTGACTGAAATGGCG
CGCCAGGGCAAGCTGGATCCGGTGCTCGGCCGCGCGCAGGAGATTGAAAGTACCATTGAGGTGCTTGCCCGCCGCAAGAA
AAACAACCCGGTGCTGATCGGCGAACCTGGCGTGGGCAAAACCGCCATAGTGGAAGGGCTGGCGCAACGCATTGTCAAAG
GTGACGTGCCCGAAGTGCTGCGGGGCAAACGCCTGGTCGAAGTGAATATCAACTCCATGGTGGCGGGCGCAAAATACCGC
GGCGAATTTGAAGAACGCGCCAAACAGTTGATTGATGAAGTCAGCGAGAAAAATGCCGAACTGATTTTGTTTATCGACGA
ACTCCATACCATTGTCGGTGCCGGTCAGGGCGGCGGCGAAGGCGGCCTGGACATTGCCAACGTGCTGAAACCGGCGCTGG
CGCGCGGTGAACTGAGCCTGATTGGCGCCACAACCCTCAATGAATACCAAAAGCATATCGAGAAAGATGCCGCGCTCGAA
CGCCGATTCCAGCCGGTTTTAGTACCGGAACCGACCGTCGACCAGACCATCGTCATTTTGCGTGGCCTGCGCGACAAGCT
GGAAGCGCACCATCAGGTGACCTTTGTTGATGAAGCGTTCGTCGCTGCGGCCGAACTGTCCGATCGCTATATCACGTCAC
GCTTCTTGCCGGACAAGGCCATCGATCTGATTGACCAGGCGGCGGCCCGCGTTCGCATTTCCGCCACCTCCCGGCCGGCT
GATATTCAGGAACTGGAAGCGGAAATCGCCCACCTGAAACGCGAGCAAGACTCGGCGTCTTCCCGTAAAAAGTTTGACGA
CGTTAAAAGCTTCGAGACGCAAATTAGTGACAAACGTGCGCGTCTTGATGAGTTAACGGAAGCCTGGCAGCGCAAAACGG
GGTCAGAAACGCTGGAAGTCACCCTGTCTTCCGTCGCTGAAGTGGTGTCGCGCCTGACCGGCATCCCGGTGACCGAGTTA
ACCCAGGAAGAGCGGAAAAAACTGCTCAATATGGAAGACAAACTGCGTGAACGCGTGGTCGGGCAAGATGACGCGGTCGA
GGCCGTCAGCGACGCCGTACGCCTGTCGCGCGCCGGGCTGAGCCAGGCACACCGCCCTATCGCCACCTTCTTGTTCCTCG
GCCCTACCGGCGTCGGCAAAACCGAGCTGGCCAAGGCCATCGCCGAAACGGTGTTCGGTGACGAACAGGCCATTATCCGT
ATCGACATGTCGGAATACATGGAGCGCCATGCCGTAGCCCGCCTGATCGGTGCCCCTCCGGGGTACGTGGGTTATGACGA
GGGCGGCCAGTTGACCGAGCGTGTAAGACGCCGCCCTTACAGCGTAATTTTGCTCGACGAGATCGAGAAAGCGCACCCGG
ACGTCTACAACGTGCTGCTGCAGGTATTCGATGATGGCCGCCTGACGGACGGTAAAGGGCGCGTGGTCGATTTCAGCAAC
ACCACCATCATTGCTACCAGCAACCTCGGTTCTGCGGTGATCATGAATAACGCCTCGCTGCCGGAGGCGGAACGCAAGTC
AGACAAGACGATTCACGATGAATTGATGCAAGTGCTCAAGGGCCACTTCCGCCCTGAGTTCCTGAACCGCATCGATGAAG
TCATCGTGTTCAACTCCCTGTCTCAGGAAAACATTCGTTTAATCGTGAATATCCAGCTTGAGCATTTAACGCGCACGGCG
GCGGCTCAGAATATCACCCTCAATATTGCCGATTCGCTGGTGGAACACCTGGTGGACGTGGGCTATCAGCCTGACTTCGG
CGCCCGTGAATTGAAACGCAGGATCCGCCAGGAAGTGGAAACCCGATTGGCGAAGGAAATTCTTGGCGACAACCTGAAGT
CAGGCGACAGCGTCGAGATTGGCTATGATCAAACCACTGACAAGGTCGTGTTTAACAAACCTATCCCCACGAGCAAGGAG
ACTGCAGCCCCACCGGCAACACCAGAACCGCCTGTTACTCAGGCTGGGCCGCAAACGCCCGCAGAGCCGCAGGCATAA

Protein sequence :
MQNGQRKSIAICDYDYRQLTRHQNILNPFDSLLGGGGALSRFFNELTEDEAAEEASGFSAEVPRESVDATDAFSKQTLEL
LQRAAEKAHELHRSELDTEHLLYVLADTDVCSALLTELKLSPQDIKAYIDQHAYKGAAETGATLEDMTVSPRLKKAFMYA
FQVSRDLGHSYVGPEHLLIGLSEVPDSIAGALLKKYGVTPAALRQKVVKLVGKGAEDGRIDTPTGTPTLDKFGRDLTEMA
RQGKLDPVLGRAQEIESTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEVLRGKRLVEVNINSMVAGAKYR
GEFEERAKQLIDEVSEKNAELILFIDELHTIVGAGQGGGEGGLDIANVLKPALARGELSLIGATTLNEYQKHIEKDAALE
RRFQPVLVPEPTVDQTIVILRGLRDKLEAHHQVTFVDEAFVAAAELSDRYITSRFLPDKAIDLIDQAAARVRISATSRPA
DIQELEAEIAHLKREQDSASSRKKFDDVKSFETQISDKRARLDELTEAWQRKTGSETLEVTLSSVAEVVSRLTGIPVTEL
TQEERKKLLNMEDKLRERVVGQDDAVEAVSDAVRLSRAGLSQAHRPIATFLFLGPTGVGKTELAKAIAETVFGDEQAIIR
IDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSN
TTIIATSNLGSAVIMNNASLPEAERKSDKTIHDELMQVLKGHFRPEFLNRIDEVIVFNSLSQENIRLIVNIQLEHLTRTA
AAQNITLNIADSLVEHLVDVGYQPDFGARELKRRIRQEVETRLAKEILGDNLKSGDSVEIGYDQTTDKVVFNKPIPTSKE
TAAPPATPEPPVTQAGPQTPAEPQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-171 46
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-104 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_18690 YP_008160509.1 protein disaggregation chaperone VFG0079 Protein 0.0 52
M621_18690 YP_008160509.1 protein disaggregation chaperone VFG0080 Protein 2e-143 48