Gene Information

Name : M621_01795 (M621_01795)
Accession : YP_008157210.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 385474 - 386136 bp
Length : 663 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAACTGCTGATTGTTGAAGACGATGAGCTGTTGCAGCAAGGGCTGGCGCTGGCATTGGCCAACGAGGGTTATGCCTG
CGACTGCGCCGCTACGGCGGCGCAAGCCAATGCGCTGCTCATTACCAGCCAATACAGCATGATCATCCTCGATCTCGGTC
TGCCCGACCAGGACGGCGCCAGCCTGCTGCGGCAGTGGCGCCGTCAGCAAGTCGACTTGCCGGTGCTGATCCTCACCGCC
CGCGACGCACTGGAAGACCGTGTCGACGGGCTGGACGCCGGTGCTGACGATTACCTGGTGAAGCCCTTCGCGCTGGTTGA
GCTGCAGGCGCGGGTGCGCGCCTTAATCCGCCGCTATCAGGGCCACAGCGACAACCTCATGCAACTGGACGATCTCCAGC
TCAATCTTTCCAGCCAGCAGGTTTACGTTCAACAACAGCCGGTTGAAGTCACGCCAAAAGAGTTCGCTATCCTGTCTCGC
CTTATGATGCGCGCCGGGCAAACGGTCAACCGTGAACTGCTGCAGCAGGACCTTTACACCTGGCAGGATGATTTAGGTTC
CAACACGCTGGAAGTGCATATCCATAACCTGCGCCGCAAATTGGGCAAGGATCGCATCCGTACCGTCCGCGGTATCGGTT
ATCGCCTGGAATCCTCATCATGA

Protein sequence : 
MKLLIVEDDELLQQGLALALANEGYACDCAATAAQANALLITSQYSMIILDLGLPDQDGASLLRQWRRQQVDLPVLILTA
RDALEDRVDGLDAGADDYLVKPFALVELQARVRALIRRYQGHSDNLMQLDDLQLNLSSQQVYVQQQPVEVTPKEFAILSR
LMMRAGQTVNRELLQQDLYTWQDDLGSNTLEVHIHNLRRKLGKDRIRTVRGIGYRLESSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-29 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_01795 YP_008157210.1 XRE family transcriptional regulator BAC0487 Protein 7e-50 66
M621_01795 YP_008157210.1 XRE family transcriptional regulator CP000647.1.gene1136. Protein 3e-22 43
M621_01795 YP_008157210.1 XRE family transcriptional regulator BAC0530 Protein 3e-22 43
M621_01795 YP_008157210.1 XRE family transcriptional regulator NC_002516.2.879194.p Protein 3e-21 42
M621_01795 YP_008157210.1 XRE family transcriptional regulator CP001918.1.gene2526. Protein 2e-22 41
M621_01795 YP_008157210.1 XRE family transcriptional regulator CP001138.1.gene1939. Protein 4e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_01795 YP_008157210.1 XRE family transcriptional regulator VFG0473 Protein 2e-43 57
M621_01795 YP_008157210.1 XRE family transcriptional regulator VFG0475 Protein 4e-22 41