Gene Information

Name : M621_16270 (M621_16270)
Accession : YP_008160041.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : transposase IS1329
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3404595 - 3405431 bp
Length : 837 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
TTGAAGAAGGCCGGTGCAAATATCCAACAAGTATGCCGCTGCTTGTCGCTCACGCGCAGCGTGTTTTATGCCCGTAGTCG
TCGGCCAATGCTCAAGCCCGATGTTCTGATGTTGTACGCGGCGGCTAAGCATGTTCACGCTGAAATGGATGCCACATATG
GCAGCCGGCGTATGTGCATCGAGTTACGAGAACAAGGTTTTAACGTGGGCAGATACCGCGTTCGGCAGATAATGAAAACC
TTATTACTGGTAGCTAAACGCCCCGGGCGCCATCGCTATCCACGCGGTGGAAAACCTGCTGTCGTTGCCGCTAATCTGTT
GAATAGACAGTTTAATCCAGAGATATTGAATACCTGGTGGTCAGGTGATATTACCTATCTGCGTACCGCTCAGGGTTGGT
TATATCTGGCTATCGTCATGGACTTATGTTCAAGAAAAATAGTGAGTTGGGCCTTCTCAGACAAACCGGACAGCGACTTG
ACCGTCCGGGCCTTAAGGTTGGCAGTAAATAAACGACGACCAACAGGGTCTGTGGTGTTCCATAGCGATCAAGGGGCGCA
ATATACCAGTACTCAGTTTCAGTCCTGCCAGCAAGAACTTGATGTGACGGGCAGTATGAGCCGCAAGGGCAACTGTCTGG
ATAATGCCGTTACGGAGAGGTTCTTCCGCAGCCTGAAAGCAGAGCGAGTTAACTACCGTCGCTATGAAACCCGAAGTCAG
GGTATTGCAGACGTTATCGATTATATCGACAGTTTTTATAACCTGAAGCGGCGGCATTACCGGCTGGGAAATATCTCGCC
GGATGAATACGAACGACGACTACAACAATGTGCCTAA

Protein sequence :
MKKAGANIQQVCRCLSLTRSVFYARSRRPMLKPDVLMLYAAAKHVHAEMDATYGSRRMCIELREQGFNVGRYRVRQIMKT
LLLVAKRPGRHRYPRGGKPAVVAANLLNRQFNPEILNTWWSGDITYLRTAQGWLYLAIVMDLCSRKIVSWAFSDKPDSDL
TVRALRLAVNKRRPTGSVVFHSDQGAQYTSTQFQSCQQELDVTGSMSRKGNCLDNAVTERFFRSLKAERVNYRRYETRSQ
GIADVIDYIDSFYNLKRRHYRLGNISPDEYERRLQQCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-113 98
tnpB CAB61574.1 transposase B Not tested HPI Protein 5e-114 98
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-36 45
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-36 45
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-36 41
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_16270 YP_008160041.1 transposase IS1329 VFG1484 Protein 6e-37 45