Gene Information

Name : M621_16265 (M621_16265)
Accession : YP_008160040.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3404284 - 3404592 bp
Length : 309 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCGAAAAAAATCATTTACTCATGAGTTTAAACAAGAGTGCGTCAATCTGGTTCTTCAGCATAAGTACCCGGTGACTCA
GGCTGCTGAAACAATGAATATTGGCCTTTCAACATTACAACGCTGGCTACGGCAGTATCGCGGAGAGATCCGCGGGAACA
CACCGATAGCCAGTGCTATAACACCGGAACAACGGCGAATACAAGAACTTGAAAAGCAGGTACGGCAGTTGCAGAGCGAC
AATGACCTGTTAAAAAAAGCTTCGGCCTTCTTCGCCATGGAAATGAACAACGACAAAAAGTCGCGGTAA

Protein sequence :
MRKKSFTHEFKQECVNLVLQHKYPVTQAAETMNIGLSTLQRWLRQYRGEIRGNTPIASAITPEQRRIQELEKQVRQLQSD
NDLLKKASAFFAMEMNNDKKSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA CAB61575.1 transposase A Not tested HPI Protein 4e-43 99
trp1329A CAB46577.1 IS1329 transposase A Not tested HPI Protein 1e-43 99
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 7e-20 52
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 5e-20 52
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 1e-19 50
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 1e-19 50
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 1e-19 50
unnamed AAC31483.1 L0004 Not tested LEE Protein 1e-19 50
api80 CAF28554.1 putative transposase Not tested YAPI Protein 2e-20 49
l7045 CAD33744.1 - Not tested PAI I 536 Protein 3e-20 49
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 3e-20 49
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 4e-18 49
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 6e-18 49
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-18 49
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 6e-18 49
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-18 49
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-18 49
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-18 49
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-18 49
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 8e-20 47
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_16265 YP_008160040.1 transposase VFG0784 Protein 4e-20 50
M621_16265 YP_008160040.1 transposase VFG1485 Protein 1e-20 49
M621_16265 YP_008160040.1 transposase VFG1123 Protein 2e-18 49
M621_16265 YP_008160040.1 transposase VFG1553 Protein 2e-16 43