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Name : gabD (M621_15830) Accession : YP_008159956.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 3302911 - 3304386 bp Length : 1476 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAGCACGACCTTCTCCGCCACCCTCAAAGATCCCGCGCTATTTCGCGAAGCAAACTACATCGATGGGCAATGGCTGCA GGCCAAAGACGGGCAAACCATCAAGATCCATAACCCGGCCACCGGCGAGTTGGTCGGCCAGGTGCCGGCCTTTGGCGCCG AAGAAACCGCGCAGGCGATAGCCGCCGCCAAAAAAGCCCAGCCGGCCTGGCGCGCGCTGACCGCCAAAGAGCGTGCCGGC AAGCTGCGCCGCCTGTTCGAACTGATGATGGAACACCAGGACGATCTGGCGCGCATCATGACCGCAGAACAGGGCAAACC TCTGGCCGAAAGCCGCGGTGAGATTGCCTATGCGGCTTCGTTTATCGAGTGGTTCGCCGAAGAGGGAAAACGCGTTTACG GCGACACCATTCCGCAAAACCTGCCCGGCCGGCGCATTATCGTGCAAAAAGAACCCATCGGGGTATTTGCCGCCATTACG CCGTGGAATTTCCCGGCGGCGATGATCACCCGCAAAGCCGGCCCCGGCTGGGCCGCGGGATGCACCGGGGTGATCCGCCC CGCCAGCCAGACCCCGTTCTCGGCGCTGGCGATTGCAGTGCTGGCCGAACGCGCCGGTTTACCGGCGGGCGTCTGCAACG TGATTACCGGGCCCAGCAAAGCGATCGGCGGCGAACTGACCGCGAACCCGGACGTACGCAAGCTCTCCTTTACCGGCAGC ACAGAGGTAGGCGCGCAGTTGCTGGCGCAGTGTGCGCCCACCATCAAAAAGACCAGCATGGAACTGGGTGGCAACGCGCC CTTTATCGTGTTTGACGATGCCGATCTGGACGCCGCCGTCGCCGGGGCGGTAGCCTCCAAATACCGTAATGCCGGCCAGA CCTGCGTGTGCACCAATCGCTTTCTGGTGCAGGACGGCGTCTACGACGCTTTTGCGGAAAAGCTGAAAACCGCGGTGGCG AAGCTGAAAGTGGGCAATGGCATGGACGAGGGCGTCACTATCGGCCCATTGATTAACCGGGAGGCGGTGGAAAAAGTCAG CGAGCATATCGCCGATGCCGTGAAACGCGGTGCTTCGGTGCTGCTGGGTGGCCAACCCCATGCACTGGGCAATAACTTTT ATACGCCGACCATCCTGACCGACGTACCGAGGCAGGCCAAAATTTTCCATGAGGAAACCTTTGGCCCGGTGGCGCCCTTG ATCCGTTTTGAGCACGAAGCCGAAGCCATCGAACTGGCGAACGACACGCCGTTCGGCCTGGCCTCGTACTTCTACAGCCG CGACATCGGCCGGGTGATGCGCGTGGCCGAAGCGCTGGAATACGGCATTGTCGGCATCAATGAAGGGCTGATCTCTACCG AGGTCGCCCCCTTTGGCGGGGTTAAAAACTCCGGCCTGGGGCGCGAAGGATCGAAGTACGGCATCGAAGATTATCTCGAG ATCAAATATCTGTGCCTTGGCGGGCTGGATATCTGA Protein sequence : MSTTFSATLKDPALFREANYIDGQWLQAKDGQTIKIHNPATGELVGQVPAFGAEETAQAIAAAKKAQPAWRALTAKERAG KLRRLFELMMEHQDDLARIMTAEQGKPLAESRGEIAYAASFIEWFAEEGKRVYGDTIPQNLPGRRIIVQKEPIGVFAAIT PWNFPAAMITRKAGPGWAAGCTGVIRPASQTPFSALAIAVLAERAGLPAGVCNVITGPSKAIGGELTANPDVRKLSFTGS TEVGAQLLAQCAPTIKKTSMELGGNAPFIVFDDADLDAAVAGAVASKYRNAGQTCVCTNRFLVQDGVYDAFAEKLKTAVA KLKVGNGMDEGVTIGPLINREAVEKVSEHIADAVKRGASVLLGGQPHALGNNFYTPTILTDVPRQAKIFHEETFGPVAPL IRFEHEAEAIELANDTPFGLASYFYSRDIGRVMRVAEALEYGIVGINEGLISTEVAPFGGVKNSGLGREGSKYGIEDYLE IKYLCLGGLDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 7e-140 | 66 |
